Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspl | AX767_RS05940 | Not Available | Positive | 1170604 - 1171809 | 42151.9 |
| type ii secretion system protein gspm | AX767_RS05945 | Not Available | Positive | 1171806 - 1172339 | 19368.1 |
| type ii secretion system protein n | AX767_RS05950 | Not Available | Positive | 1172364 - 1173161 | 27931.3 |
| type ii secretion system secretin gspd | AX767_RS05955 | Not Available | Positive | 1173166 - 1175445 | 79297.5 |
| gspe/pule family protein | AX767_RS05960 | Not Available | Positive | 1175449 - 1176840 | 50098.4 |
| type ii secretion system inner membrane protein gspf | AX767_RS05965 | Not Available | Positive | 1176860 - 1178092 | 43206.6 |
| 5'-nucleotidase | AX767_RS05970 | Not Available | Positive | 1178097 - 1178996 | 32874.2 |
| argininosuccinate synthase | AX767_RS05975 | Not Available | Positive | 1179057 - 1180388 | 49114.0 |
| abc transporter atp-binding protein/permease | AX767_RS05980 | Not Available | Positive | 1180484 - 1182286 | 66391.6 |
| hypothetical protein | AX767_RS21860 | Not Available | Negative | 1182302 - 1183276 | 33532.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
