Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | AX767_RS05890 | Not Available | Negative | 1162586 - 1163851 | 43857.3 |
| 2-polyprenyl-3-methyl-6-methoxy-1,4- benzoquinone monooxygenase | AX767_RS05895 | Not Available | Positive | 1164134 - 1164763 | 22457.7 |
| osmc family protein | AX767_RS05900 | Not Available | Negative | 1164776 - 1165225 | 15836.1 |
| threonine ammonia-lyase, biosynthetic | AX767_RS05905 | Not Available | Positive | 1165463 - 1167007 | 56080.4 |
| type ii secretion system protein n | AX767_RS05910 | Not Available | Negative | 1167008 - 1167487 | 16049.3 |
| type ii secretion system major pseudopilin gspg | AX767_RS05915 | Not Available | Positive | 1167510 - 1167959 | 16167.5 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | AX767_RS05920 | Not Available | Positive | 1167934 - 1168395 | 15631.1 |
| type ii secretion system minor pseudopilin gspi | AX767_RS05925 | Not Available | Positive | 1168392 - 1168766 | 13217.2 |
| pulj/gspj family protein | AX767_RS05930 | Not Available | Positive | 1168766 - 1169422 | 24054.7 |
| type ii secretion system minor pseudopilin gspk | AX767_RS05935 | Not Available | Positive | 1169419 - 1170465 | 36827.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
