Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-arabinitol 4-dehydrogenase | AX767_RS05790 | Not Available | Negative | 1139555 - 1140952 | 50980.9 |
| abc transporter atp-binding protein | AX767_RS05795 | Not Available | Negative | 1141013 - 1142044 | 36788.6 |
| carbohydrate abc transporter permease | AX767_RS05800 | Not Available | Negative | 1142059 - 1142880 | 30132.6 |
| carbohydrate abc transporter permease | AX767_RS05805 | Not Available | Negative | 1142888 - 1143754 | 32299.7 |
| abc transporter substrate-binding protein | AX767_RS05810 | Not Available | Negative | 1143785 - 1145092 | 47203.5 |
| duf805 domain-containing protein | AX767_RS05815 | Not Available | Negative | 1145313 - 1145645 | 12281.1 |
| glucose-6-phosphate isomerase | AX767_RS05820 | Not Available | Negative | 1145722 - 1147242 | 55317.6 |
| transaldolase | AX767_RS05825 | Not Available | Negative | 1147239 - 1148189 | 34393.2 |
| lipocalin family protein | AX767_RS05830 | Not Available | Positive | 1148357 - 1149058 | 25265.1 |
| had family hydrolase | AX767_RS05835 | Not Available | Negative | 1149042 - 1149695 | 24099.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
