Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1a | AX767_RS05640 | Not Available | Positive | 1108141 - 1110549 | 87754.3 |
| iron donor protein cyay | AX767_RS05645 | Not Available | Negative | 1110560 - 1110892 | 12126.1 |
| lps translocon maturation chaperone lptm | AX767_RS05650 | Not Available | Positive | 1110905 - 1111150 | 8021.85 |
| diaminopimelate decarboxylase | AX767_RS05655 | Not Available | Positive | 1111147 - 1112430 | 45644.9 |
| sulfite oxidase heme-binding subunit yedz | AX767_RS05660 | Not Available | Negative | 1112452 - 1113099 | 24471.0 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | AX767_RS05665 | Not Available | Negative | 1113113 - 1114111 | 36851.2 |
| c-type cytochrome biogenesis protein ccsb | AX767_RS05670 | Not Available | Negative | 1114229 - 1115545 | 48896.1 |
| cytochrome c biogenesis protein resb | AX767_RS05675 | Not Available | Negative | 1115542 - 1117677 | 77579.5 |
| c-type cytochrome | AX767_RS05680 | Not Available | Negative | 1117778 - 1118452 | 23358.1 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | AX767_RS05685 | Not Available | Positive | 1118524 - 1119264 | 26658.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
