Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1415 domain-containing protein | AX767_RS05590 | Not Available | Negative | 1098128 - 1098703 | 20567.2 |
| cynx/nimt family mfs transporter | AX767_RS05595 | Not Available | Negative | 1098700 - 1099932 | 41586.8 |
| deoxyguanosinetriphosphate triphosphohydrolase | AX767_RS05600 | Not Available | Negative | 1099953 - 1101086 | 42640.6 |
| 3-dehydroquinate synthase | AX767_RS21850 | Not Available | Negative | 1101109 - 1102209 | 39054.4 |
| shikimate kinase | AX767_RS21855 | Not Available | Negative | 1102267 - 1102812 | 20109.2 |
| type iv pilus secretin family protein | AX767_RS05615 | Not Available | Negative | 1102837 - 1104996 | 76847.8 |
| pilus assembly protein pilp | AX767_RS05620 | Not Available | Negative | 1104993 - 1105502 | 18619.3 |
| type 4a pilus biogenesis protein pilo | AX767_RS05625 | Not Available | Negative | 1105532 - 1106206 | 24822.8 |
| piln domain-containing protein | AX767_RS05630 | Not Available | Negative | 1106216 - 1106833 | 22548.2 |
| pilus assembly protein pilm | AX767_RS05635 | Not Available | Negative | 1106830 - 1107909 | 38908.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
