Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stas domain-containing protein | AX767_RS05540 | Not Available | Negative | 1086104 - 1086382 | 9431.55 |
| mlac/ttg2d family abc transporter substrate-binding protein | AX767_RS05545 | Not Available | Negative | 1086411 - 1087067 | 23670.6 |
| vacj family lipoprotein | AX767_RS05550 | Not Available | Negative | 1087151 - 1087894 | 26700.7 |
| outer membrane lipid asymmetry maintenance protein mlad | AX767_RS05555 | Not Available | Negative | 1087891 - 1088376 | 17208.5 |
| lipid asymmetry maintenance abc transporter permease subunit mlae | AX767_RS05560 | Not Available | Negative | 1088396 - 1089178 | 27684.4 |
| abc transporter atp-binding protein | AX767_RS05565 | Not Available | Negative | 1089175 - 1090002 | 29550.7 |
| glutamate synthase subunit beta | AX767_RS05570 | Not Available | Negative | 1090096 - 1091574 | 53874.4 |
| glutamate synthase-related protein | AX767_RS05575 | Not Available | Negative | 1091621 - 1096360 | 172924.0 |
| transposase | AX767_RS05580 | Not Available | Negative | 1096543 - 1097253 | 26074.8 |
| class i sam-dependent methyltransferase | AX767_RS05585 | Not Available | Negative | 1097262 - 1098131 | 31989.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
