Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AX767_RS05315 | Not Available | Positive | 1046886 - 1047191 | 11058.5 |
| tyrosine-type recombinase/integrase | AX767_RS05320 | Not Available | Positive | 1047339 - 1048568 | 45414.8 |
| helix-turn-helix transcriptional regulator | AX767_RS20920 | Not Available | Positive | 1048754 - 1049014 | 9220.37 |
| toprim domain-containing protein | AX767_RS05325 | Not Available | Positive | 1049025 - 1049861 | 29992.8 |
| yfji family protein | AX767_RS05330 | Not Available | Positive | 1049948 - 1051414 | 53337.8 |
| hypothetical protein | AX767_RS21255 | Not Available | Positive | 1051585 - 1051869 | 10586.7 |
| duf3883 domain-containing protein | AX767_RS05335 | Not Available | Negative | 1052008 - 1052901 | 33098.6 |
| dead/deah box helicase | AX767_RS05340 | Not Available | Negative | 1052898 - 1054724 | 68322.0 |
| hypothetical protein | AX767_RS05345 | Not Available | Negative | 1054718 - 1056031 | 48493.9 |
| bglii/bstyi family type ii restriction endonuclease | AX767_RS05350 | Not Available | Negative | 1056033 - 1056491 | 16328.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
