Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cnp1-like family protein | AX767_RS05215 | Not Available | Positive | 1027388 - 1027894 | 18170.7 |
| glutamate 5-kinase | AX767_RS05220 | Not Available | Negative | 1027900 - 1029054 | 40561.8 |
| obg family gtpase cgta | AX767_RS05225 | Not Available | Negative | 1029056 - 1030132 | 38781.6 |
| 50s ribosomal protein l27 | AX767_RS05230 | Not Available | Negative | 1030200 - 1030460 | 8939.97 |
| 50s ribosomal protein l21 | AX767_RS05235 | Not Available | Negative | 1030473 - 1030784 | 11281.8 |
| polyprenyl synthetase family protein | AX767_RS05240 | Not Available | Positive | 1030964 - 1031956 | 34880.8 |
| Trna-pro | Not Available | Not Available | Positive | 1032000 - 1032076 | Not Available |
| type iv-a pilus assembly atpase pilb | AX767_RS05250 | Not Available | Positive | 1032195 - 1033928 | 62384.1 |
| type ii secretion system f family protein | AX767_RS05255 | Not Available | Positive | 1033949 - 1035169 | 44379.6 |
| prepilin peptidase | AX767_RS05260 | Not Available | Positive | 1035169 - 1036131 | 33793.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
