Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ofa family mfs transporter | AX767_RS04870 | Not Available | Negative | 960349 - 962034 | 59304.9 |
| lysr family transcriptional regulator | AX767_RS04875 | Not Available | Negative | 962173 - 963114 | 33956.5 |
| iron-sulfur cluster carrier protein apbc | AX767_RS04880 | Not Available | Negative | 963131 - 964222 | 38244.5 |
| patatin-like phospholipase family protein | AX767_RS04885 | Not Available | Positive | 964264 - 965475 | 42906.7 |
| yceh family protein | AX767_RS04890 | Not Available | Negative | 965488 - 966174 | 24009.8 |
| isocitrate/isopropylmalate dehydrogenase family protein | AX767_RS04895 | Not Available | Negative | 966180 - 967211 | 36773.8 |
| sdr family nad(p)-dependent oxidoreductase | AX767_RS04900 | Not Available | Negative | 967472 - 968173 | 25188.3 |
| 2-hydroxychromene-2-carboxylate isomerase | AX767_RS04905 | Not Available | Negative | 968170 - 968760 | 21736.7 |
| 2-hydroxychromene-2-carboxylate isomerase | AX767_RS04910 | Not Available | Negative | 968810 - 969436 | 23277.8 |
| sdr family nad(p)-dependent oxidoreductase | AX767_RS04915 | Not Available | Negative | 969438 - 970190 | 27318.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
