Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate abc transporter atp-binding protein | AX767_RS04825 | Not Available | Positive | 950230 - 951051 | 28841.0 |
| phne/ptxc family abc transporter permease | AX767_RS04830 | Not Available | Positive | 951042 - 951872 | 29019.2 |
| phosphonate abc transporter, permease protein phne | AX767_RS04835 | Not Available | Positive | 951878 - 952663 | 27556.0 |
| trna 2-selenouridine(34) synthase mnmh | AX767_RS04840 | Not Available | Positive | 952656 - 953729 | 39800.8 |
| formate dehydrogenase accessory sulfurtransferase fdhd | AX767_RS04845 | Not Available | Negative | 953741 - 954604 | 30395.7 |
| serine hydrolase domain-containing protein | AX767_RS21825 | Not Available | Negative | 954848 - 955177 | 11636.7 |
| serine hydrolase domain-containing protein | AX767_RS04850 | Not Available | Negative | 955405 - 956571 | 43002.1 |
| sdr family nad(p)-dependent oxidoreductase | AX767_RS04855 | Not Available | Negative | 956741 - 957547 | 27606.4 |
| hypothetical protein | AX767_RS04860 | Not Available | Negative | 957590 - 957847 | 8802.77 |
| fdhf/ydep family oxidoreductase | AX767_RS04865 | Not Available | Negative | 957855 - 960209 | 85926.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
