Methylomonas sp. DH-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Methylococcales

Family

Methylococcaceae

Genus

Methylomonas

Description

Methylomonas sp. DH-1 is a type of methanotrophic bacterium, which is known for its ability to utilize methane as a carbon source. This species is characterized by having two replicons, indicating a complex genetic architecture that can potentially enhance its adaptability to various environmental conditions. The genome of Methylomonas sp. DH-1 is accessible through two specific accession numbers: NZ_CP014360.1 and NZ_CP014361.1. These genomic sequences provide insights into the organism's metabolic capabilities and genetic features. As a methanotroph, Methylomonas sp. DH-1 plays a significant role in carbon cycling, particularly in environments where methane is prevalent. By converting methane into biomass and other compounds, this bacterium contributes to the reduction of greenhouse gases in the atmosphere. This ability not only highlights its ecological importance but also suggests potential applications in bioremediation and bioengineering. In summary, Methylomonas sp. DH-1, with its two replicons and unique metabolic pathways, exemplifies the ecological roles of methanotrophic bacteria in mitigating methane emissions and promoting carbon cycling in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMethylococcales
FamilyMethylococcaceae
GenusMethylomonas
SpeciesMethylomonas sp. DH-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylomonas sp. DH-1 chromosome, complete genome.

Gene Summary

Adenine Count

1057259 bp

Thymine Count

1053736 bp

Guanine Count

1363554 bp

Cytosine Count

1374983 bp

Genome Length

4849532 bp

Protein-coding Genes

4308 genes

Non-Coding Genes

125 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
f0f1 atp synthase subunit epsilonAYM39_RS00510Not AvailablePositive121130 - 12155215153.3
bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmuAYM39_RS00515Not AvailablePositive121624 - 12304851390.3
glutamine--fructose-6-phosphate transaminase (isomerizing)AYM39_RS00520Not AvailablePositive123048 - 12488366707.6
nucleoside deaminaseAYM39_RS00525Not AvailablePositive125133 - 12558516778.8
diguanylate cyclase domain-containing proteinAYM39_RS00530Not AvailablePositive125578 - 12747671876.2
gnat family n-acetyltransferaseAYM39_RS00535Not AvailablePositive127724 - 12821817901.6
lyttr family dna-binding domain-containing proteinAYM39_RS00540Not AvailableNegative128368 - 12916230129.2
lyts/yhck type 5tm receptor domain-containing proteinAYM39_RS00545Not AvailableNegative129156 - 13048148325.9
hypothetical proteinAYM39_RS00550Not AvailablePositive130821 - 13182237183.3
rna polymerase sigma factorAYM39_RS00555Not AvailablePositive132039 - 13256020270.2

Displaying genes 231 – 240 of 4682 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm000435115-cis-4,4'-diapophytoeneC30H48Chemical structure of 15-cis-4,4'-diapophytoeneNot available
Average408.714Da
Monoisotopic408.375601546Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.