Methylomonas sp. DH-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Methylococcales

Family

Methylococcaceae

Genus

Methylomonas

Description

Methylomonas sp. DH-1 is a type of methanotrophic bacterium, which is known for its ability to utilize methane as a carbon source. This species is characterized by having two replicons, indicating a complex genetic architecture that can potentially enhance its adaptability to various environmental conditions. The genome of Methylomonas sp. DH-1 is accessible through two specific accession numbers: NZ_CP014360.1 and NZ_CP014361.1. These genomic sequences provide insights into the organism's metabolic capabilities and genetic features. As a methanotroph, Methylomonas sp. DH-1 plays a significant role in carbon cycling, particularly in environments where methane is prevalent. By converting methane into biomass and other compounds, this bacterium contributes to the reduction of greenhouse gases in the atmosphere. This ability not only highlights its ecological importance but also suggests potential applications in bioremediation and bioengineering. In summary, Methylomonas sp. DH-1, with its two replicons and unique metabolic pathways, exemplifies the ecological roles of methanotrophic bacteria in mitigating methane emissions and promoting carbon cycling in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMethylococcales
FamilyMethylococcaceae
GenusMethylomonas
SpeciesMethylomonas sp. DH-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylomonas sp. DH-1 chromosome, complete genome.

Gene Summary

Adenine Count

1057259 bp

Thymine Count

1053736 bp

Guanine Count

1363554 bp

Cytosine Count

1374983 bp

Genome Length

4849532 bp

Protein-coding Genes

4308 genes

Non-Coding Genes

125 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phenylacetate--coa ligase family proteinAYM39_RS07420Not AvailablePositive1602651 - 160415655303.6
alpha-isopropylmalate synthase regulatory domain-containing proteinAYM39_RS07425Not AvailablePositive1604306 - 160585356406.3
pseudouridine synthaseAYM39_RS07430Not AvailablePositive1605981 - 160670327472.9
type ii toxin-antitoxin system vapc family toxinAYM39_RS07435Not AvailableNegative1606713 - 160710814492.3
abrb/maze/spovt family dna-binding domain-containing proteinAYM39_RS07440Not AvailableNegative1607105 - 16073719257.04
hypothetical proteinAYM39_RS24350Not AvailablePositive1607399 - 16075425311.36
uma2 family endonucleaseAYM39_RS07445Not AvailableNegative1607568 - 160816422063.0
is5 family transposaseAYM39_RS07450Not AvailablePositive1608634 - 160916420673.9
type ii toxin-antitoxin system vapb family antitoxinAYM39_RS07455Not AvailablePositive1609343 - 16095527816.47
type ii toxin-antitoxin system vapc family toxinAYM39_RS07460Not AvailablePositive1609549 - 160993214102.1

Displaying genes 1611 – 1620 of 4682 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm000435115-cis-4,4'-diapophytoeneC30H48Chemical structure of 15-cis-4,4'-diapophytoeneNot available
Average408.714Da
Monoisotopic408.375601546Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.