Methylomonas sp. DH-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Methylococcales

Family

Methylococcaceae

Genus

Methylomonas

Description

Methylomonas sp. DH-1 is a type of methanotrophic bacterium, which is known for its ability to utilize methane as a carbon source. This species is characterized by having two replicons, indicating a complex genetic architecture that can potentially enhance its adaptability to various environmental conditions. The genome of Methylomonas sp. DH-1 is accessible through two specific accession numbers: NZ_CP014360.1 and NZ_CP014361.1. These genomic sequences provide insights into the organism's metabolic capabilities and genetic features. As a methanotroph, Methylomonas sp. DH-1 plays a significant role in carbon cycling, particularly in environments where methane is prevalent. By converting methane into biomass and other compounds, this bacterium contributes to the reduction of greenhouse gases in the atmosphere. This ability not only highlights its ecological importance but also suggests potential applications in bioremediation and bioengineering. In summary, Methylomonas sp. DH-1, with its two replicons and unique metabolic pathways, exemplifies the ecological roles of methanotrophic bacteria in mitigating methane emissions and promoting carbon cycling in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMethylococcales
FamilyMethylococcaceae
GenusMethylomonas
SpeciesMethylomonas sp. DH-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylomonas sp. DH-1 chromosome, complete genome.

Gene Summary

Adenine Count

1057259 bp

Thymine Count

1053736 bp

Guanine Count

1363554 bp

Cytosine Count

1374983 bp

Genome Length

4849532 bp

Protein-coding Genes

4308 genes

Non-Coding Genes

125 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formaldehyde-activating enzymeAYM39_RS06230Not AvailableNegative1327310 - 132785819650.0
is3 family transposaseAYM39_RS24335Not AvailablePositive1328058 - 132835411335.7
is3 family transposaseAYM39_RS24340Not AvailablePositive1328351 - 132877616264.6
group ii intron reverse transcriptase/maturaseAYM39_RS06245Not AvailablePositive1329268 - 133050947922.3
is5 family transposaseAYM39_RS06250Not AvailablePositive1330589 - 133107418483.4
pyridoxamine 5'-phosphate oxidase family proteinAYM39_RS06255Not AvailableNegative1331117 - 133177324357.9
rna polymerase sigma factorAYM39_RS06260Not AvailablePositive1332172 - 133269919548.1
fecr domain-containing proteinAYM39_RS06265Not AvailablePositive1332755 - 133381639120.4
is5 family transposaseAYM39_RS06270Not AvailablePositive1334024 - 133500336174.9
tonb-dependent receptorAYM39_RS06275Not AvailablePositive1335297 - 133769089042.3

Displaying genes 1371 – 1380 of 4682 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm000435115-cis-4,4'-diapophytoeneC30H48Chemical structure of 15-cis-4,4'-diapophytoeneNot available
Average408.714Da
Monoisotopic408.375601546Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.