Methylomonas sp. DH-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Methylococcales

Family

Methylococcaceae

Genus

Methylomonas

Description

Methylomonas sp. DH-1 is a type of methanotrophic bacterium, which is known for its ability to utilize methane as a carbon source. This species is characterized by having two replicons, indicating a complex genetic architecture that can potentially enhance its adaptability to various environmental conditions. The genome of Methylomonas sp. DH-1 is accessible through two specific accession numbers: NZ_CP014360.1 and NZ_CP014361.1. These genomic sequences provide insights into the organism's metabolic capabilities and genetic features. As a methanotroph, Methylomonas sp. DH-1 plays a significant role in carbon cycling, particularly in environments where methane is prevalent. By converting methane into biomass and other compounds, this bacterium contributes to the reduction of greenhouse gases in the atmosphere. This ability not only highlights its ecological importance but also suggests potential applications in bioremediation and bioengineering. In summary, Methylomonas sp. DH-1, with its two replicons and unique metabolic pathways, exemplifies the ecological roles of methanotrophic bacteria in mitigating methane emissions and promoting carbon cycling in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMethylococcales
FamilyMethylococcaceae
GenusMethylomonas
SpeciesMethylomonas sp. DH-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylomonas sp. DH-1 chromosome, complete genome.

Gene Summary

Adenine Count

1057259 bp

Thymine Count

1053736 bp

Guanine Count

1363554 bp

Cytosine Count

1374983 bp

Genome Length

4849532 bp

Protein-coding Genes

4308 genes

Non-Coding Genes

125 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nudix hydrolaseAYM39_RS05715Not AvailableNegative1212515 - 121420062842.8
hypothetical proteinAYM39_RS23715Not AvailableNegative1214211 - 12143876759.85
type ii toxin-antitoxin system vapc family toxinAYM39_RS05720Not AvailableNegative1214393 - 121479414942.2
hypothetical proteinAYM39_RS05725Not AvailableNegative1214791 - 12150279000.66
ribbon-helix-helix domain-containing proteinAYM39_RS05730Not AvailableNegative1215039 - 12152668923.52
hypothetical proteinAYM39_RS05735Not AvailableNegative1215263 - 121666654999.8
tetratricopeptide repeat proteinAYM39_RS05740Not AvailableNegative1216678 - 121830662985.6
hypothetical proteinAYM39_RS05745Not AvailableNegative1218350 - 121891320721.9
zinc ribbon domain-containing proteinAYM39_RS05750Not AvailableNegative1219187 - 121993626947.8
undecaprenyl-phosphate glucose phosphotransferaseAYM39_RS05755Not AvailablePositive1220311 - 122173253587.8

Displaying genes 1281 – 1290 of 4682 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm000435115-cis-4,4'-diapophytoeneC30H48Chemical structure of 15-cis-4,4'-diapophytoeneNot available
Average408.714Da
Monoisotopic408.375601546Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.