Hymenobacter sp. PAMC 26628

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter sp. PAMC 26628 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species possesses two replicons, which indicates a certain level of genomic complexity that may contribute to its adaptability in various environments. The genomic information for Hymenobacter sp. PAMC 26628 can be found under the accession numbers NZ_CP014303.1 and NZ_CP014304.1. Hymenobacter sp. is a member of the diverse Hymenobacter genus, which is known for its role in soil and aquatic ecosystems. The presence of this organism in natural habitats suggests it may play a significant role in nutrient cycling and the degradation of organic materials. Its ability to thrive in various environments reflects the ecological versatility of the Hymenobacter genus, which can influence microbial community dynamics. Overall, the characteristics of Hymenobacter sp. PAMC 26628 underscore its potential contributions to ecological processes, particularly in soil health and sustainability. Further research could elucidate its specific functions within microbial communities and its interactions with other organisms in its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter sp. PAMC 26628
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter sp. PAMC 26628 plasmid unnamed, complete sequence.

Gene Summary

Adenine Count

18550 bp

Thymine Count

17985 bp

Guanine Count

26910 bp

Cytosine Count

26151 bp

Genome Length

89596 bp

Protein-coding Genes

83 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux rnd transporter periplasmic adaptor subunitAXW84_RS20875Not AvailablePositive4822346 - 482350041454.5
efflux rnd transporter permease subunitAXW84_RS20880Not AvailablePositive4823660 - 4826842114311.0
efflux transporter outer membrane subunitAXW84_RS20885Not AvailablePositive4826891 - 482833952703.1
thioredoxin family proteinAXW84_RS20890Not AvailablePositive4828432 - 482904321882.4
duf4382 domain-containing proteinAXW84_RS20895Not AvailableNegative4829159 - 483000730073.9
asma-like c-terminal region-containing proteinAXW84_RS20900Not AvailableNegative4830153 - 4833194108319.0
porp/sprf family type ix secretion system membrane proteinAXW84_RS20905Not AvailablePositive4833357 - 483441537542.6
gliding motility lipoprotein gldjAXW84_RS20910Not AvailablePositive4834497 - 483573845864.5
comf family proteinAXW84_RS20915Not AvailableNegative4835939 - 483663124839.2
carboxymuconolactone decarboxylase family proteinAXW84_RS20920Not AvailablePositive4836751 - 483714914841.7

Displaying genes 4381 – 4390 of 4790 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.