Hymenobacter sp. PAMC 26628

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter sp. PAMC 26628 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species possesses two replicons, which indicates a certain level of genomic complexity that may contribute to its adaptability in various environments. The genomic information for Hymenobacter sp. PAMC 26628 can be found under the accession numbers NZ_CP014303.1 and NZ_CP014304.1. Hymenobacter sp. is a member of the diverse Hymenobacter genus, which is known for its role in soil and aquatic ecosystems. The presence of this organism in natural habitats suggests it may play a significant role in nutrient cycling and the degradation of organic materials. Its ability to thrive in various environments reflects the ecological versatility of the Hymenobacter genus, which can influence microbial community dynamics. Overall, the characteristics of Hymenobacter sp. PAMC 26628 underscore its potential contributions to ecological processes, particularly in soil health and sustainability. Further research could elucidate its specific functions within microbial communities and its interactions with other organisms in its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter sp. PAMC 26628
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter sp. PAMC 26628 plasmid unnamed, complete sequence.

Gene Summary

Adenine Count

18550 bp

Thymine Count

17985 bp

Guanine Count

26910 bp

Cytosine Count

26151 bp

Genome Length

89596 bp

Protein-coding Genes

83 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diaminopimelate epimeraseAXW84_RS17670Not AvailableNegative4078573 - 407938228845.9
penicillin-binding protein 2AXW84_RS17675Not AvailableNegative4079606 - 408151969243.2
class i sam-dependent methyltransferaseAXW84_RS17680Not AvailablePositive4081741 - 408262533627.0
gnat family n-acetyltransferaseAXW84_RS17685Not AvailablePositive4082788 - 408332418925.7
hypothetical proteinAXW84_RS17690Not AvailablePositive4083335 - 408428234030.5
putative zinc-binding metallopeptidaseAXW84_RS17695Not AvailableNegative4084343 - 408542540774.8
circularly permuted type 2 atp-grasp proteinAXW84_RS17700Not AvailablePositive4085707 - 408716454417.6
alpha-e domain-containing proteinAXW84_RS17705Not AvailablePositive4087414 - 408834935354.9
transglutaminase family proteinAXW84_RS17710Not AvailablePositive4088541 - 408951236025.7
hypothetical proteinAXW84_RS17715Not AvailablePositive4089610 - 40898348360.02

Displaying genes 3721 – 3730 of 4790 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.