Hymenobacter sp. PAMC 26628

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter sp. PAMC 26628 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species possesses two replicons, which indicates a certain level of genomic complexity that may contribute to its adaptability in various environments. The genomic information for Hymenobacter sp. PAMC 26628 can be found under the accession numbers NZ_CP014303.1 and NZ_CP014304.1. Hymenobacter sp. is a member of the diverse Hymenobacter genus, which is known for its role in soil and aquatic ecosystems. The presence of this organism in natural habitats suggests it may play a significant role in nutrient cycling and the degradation of organic materials. Its ability to thrive in various environments reflects the ecological versatility of the Hymenobacter genus, which can influence microbial community dynamics. Overall, the characteristics of Hymenobacter sp. PAMC 26628 underscore its potential contributions to ecological processes, particularly in soil health and sustainability. Further research could elucidate its specific functions within microbial communities and its interactions with other organisms in its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter sp. PAMC 26628
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter sp. PAMC 26628 plasmid unnamed, complete sequence.

Gene Summary

Adenine Count

18550 bp

Thymine Count

17985 bp

Guanine Count

26910 bp

Cytosine Count

26151 bp

Genome Length

89596 bp

Protein-coding Genes

83 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mlad family proteinAXW84_RS16440Not AvailableNegative3780921 - 378193135640.9
n-acetylmuramoyl-l-alanine amidaseAXW84_RS16445Not AvailableNegative3782019 - 378279828518.9
putative lps assembly protein lptdAXW84_RS25125Not AvailablePositive3782896 - 3785913109542.0
3-methyl-2-oxobutanoate hydroxymethyltransferaseAXW84_RS16455Not AvailablePositive3785979 - 378679429649.1
cell envelope integrity protein credAXW84_RS16460Not AvailablePositive3786950 - 378841352374.6
rlua family pseudouridine synthaseAXW84_RS16465Not AvailablePositive3788569 - 378927926346.1
acyl-coa desaturaseAXW84_RS16470Not AvailablePositive3789500 - 379027330480.7
30s ribosomal protein s16AXW84_RS16475Not AvailablePositive3790665 - 379121319830.3
ribosome maturation factor rimmAXW84_RS16480Not AvailablePositive3791305 - 379188021352.6
trna (guanosine(37)-n1)-methyltransferase trmdAXW84_RS16485Not AvailablePositive3791896 - 379258525222.3

Displaying genes 3471 – 3480 of 4790 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.