Hymenobacter sp. PAMC 26628

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter sp. PAMC 26628 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species possesses two replicons, which indicates a certain level of genomic complexity that may contribute to its adaptability in various environments. The genomic information for Hymenobacter sp. PAMC 26628 can be found under the accession numbers NZ_CP014303.1 and NZ_CP014304.1. Hymenobacter sp. is a member of the diverse Hymenobacter genus, which is known for its role in soil and aquatic ecosystems. The presence of this organism in natural habitats suggests it may play a significant role in nutrient cycling and the degradation of organic materials. Its ability to thrive in various environments reflects the ecological versatility of the Hymenobacter genus, which can influence microbial community dynamics. Overall, the characteristics of Hymenobacter sp. PAMC 26628 underscore its potential contributions to ecological processes, particularly in soil health and sustainability. Further research could elucidate its specific functions within microbial communities and its interactions with other organisms in its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter sp. PAMC 26628
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter sp. PAMC 26628 plasmid unnamed, complete sequence.

Gene Summary

Adenine Count

18550 bp

Thymine Count

17985 bp

Guanine Count

26910 bp

Cytosine Count

26151 bp

Genome Length

89596 bp

Protein-coding Genes

83 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methylmalonyl-coa epimeraseAXW84_RS13610Not AvailableNegative3121933 - 312234314354.4
iscs subfamily cysteine desulfuraseAXW84_RS13615Not AvailablePositive3122481 - 312369543975.1
fe-s cluster assembly scaffold iscuAXW84_RS13620Not AvailablePositive3123799 - 312420914585.4
iron-sulfur cluster assembly accessory proteinAXW84_RS13625Not AvailablePositive3124377 - 312470311887.9
polynucleotide kinase-phosphataseAXW84_RS13630Not AvailableNegative3124786 - 312741696801.3
hypothetical proteinAXW84_RS24985Not AvailablePositive3127415 - 312873149923.5
3' terminal rna ribose 2'-o-methyltransferase hen1AXW84_RS13635Not AvailableNegative3128728 - 313016452968.2
hypothetical proteinAXW84_RS13640Not AvailablePositive3130260 - 313098827556.3
glutamate racemaseAXW84_RS13645Not AvailableNegative3131047 - 313188930317.6
hypothetical proteinAXW84_RS13650Not AvailablePositive3132004 - 31322318240.92

Displaying genes 2871 – 2880 of 4790 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.