Hymenobacter sp. PAMC 26628

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter sp. PAMC 26628 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species possesses two replicons, which indicates a certain level of genomic complexity that may contribute to its adaptability in various environments. The genomic information for Hymenobacter sp. PAMC 26628 can be found under the accession numbers NZ_CP014303.1 and NZ_CP014304.1. Hymenobacter sp. is a member of the diverse Hymenobacter genus, which is known for its role in soil and aquatic ecosystems. The presence of this organism in natural habitats suggests it may play a significant role in nutrient cycling and the degradation of organic materials. Its ability to thrive in various environments reflects the ecological versatility of the Hymenobacter genus, which can influence microbial community dynamics. Overall, the characteristics of Hymenobacter sp. PAMC 26628 underscore its potential contributions to ecological processes, particularly in soil health and sustainability. Further research could elucidate its specific functions within microbial communities and its interactions with other organisms in its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter sp. PAMC 26628
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter sp. PAMC 26628 plasmid unnamed, complete sequence.

Gene Summary

Adenine Count

18550 bp

Thymine Count

17985 bp

Guanine Count

26910 bp

Cytosine Count

26151 bp

Genome Length

89596 bp

Protein-coding Genes

83 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
age family epimerase/isomeraseAXW84_RS13475Not AvailablePositive3082797 - 308396643344.9
hypothetical proteinAXW84_RS13480Not AvailablePositive3083998 - 308568361137.8
glycoside hydrolase family 28 proteinAXW84_RS13485Not AvailablePositive3085735 - 308729456395.8
hypothetical proteinAXW84_RS13490Not AvailableNegative3087459 - 30876386607.43
Trna-lysNot AvailableNot AvailablePositive3088071 - 3088146Not Available
hypothetical proteinAXW84_RS13500Not AvailablePositive3088276 - 308899526003.6
sdr family oxidoreductaseAXW84_RS13505Not AvailableNegative3089505 - 309030527605.5
geved domain-containing proteinAXW84_RS26340Not AvailablePositive3090485 - 309275276605.3
gliding motility-associated c-terminal domain-containing proteinAXW84_RS13515Not AvailablePositive3093011 - 3096460116320.0
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdAXW84_RS13520Not AvailablePositive3096774 - 309818653668.2

Displaying genes 2841 – 2850 of 4790 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.