Stenotrophomonas sp. KCTC 12332 strain YM1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas sp. KCTC 12332 strain YM1 is characterized as a rod-shaped bacterium. This strain possesses flagella, which indicates its ability to move in its environment. It contains a single replicon, essential for its genetic stability and replication. The strain is cataloged under the accession NZ_CP014274.1, which allows for its identification and further study within microbial databases. Accessions are crucial for tracking genomic information and understanding the genetic landscape of Stenotrophomonas sp. KCTC 12332. Stenotrophomonas species are known for their versatility and adaptability in various environments, often found in soil and water. Their flagella contribute to motility, potentially aiding in colonization and survival in diverse ecological niches. This strain's rod shape is typical of many bacteria, allowing for efficient nutrient uptake and interaction with its surroundings. In summary, Stenotrophomonas sp. KCTC 12332 strain YM1 exhibits significant traits, such as its rod shape, flagella presence, and a single replicon, which may enhance its ecological adaptability. Understanding these characteristics can provide insights into its role within microbial communities and its potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas sp. KCTC 12332
Strainstrain YM1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas sp. KCTC 12332 strain YM1 chromosome, complete

Gene Summary

Adenine Count

838014 bp

Thymine Count

804558 bp

Guanine Count

1399961 bp

Cytosine Count

1499061 bp

Genome Length

4541594 bp

Protein-coding Genes

3860 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nuclear transport factor 2 family proteinAXG53_RS09470Not AvailableNegative2258196 - 225864816059.5
long-chain fatty acid--coa ligaseAXG53_RS09475Not AvailablePositive2258754 - 226043661476.7
calcineurin-like phosphoesterase c-terminal domain-containing proteinAXG53_RS09480Not AvailableNegative2260926 - 226244955407.4
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisieAXG53_RS09485Not AvailableNegative2262703 - 226334123260.6
imidazole glycerol phosphate synthase subunit hisfAXG53_RS09490Not AvailableNegative2263331 - 226410728281.7
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseAXG53_RS09495Not AvailableNegative2264101 - 226483525765.9
imidazole glycerol phosphate synthase subunit hishAXG53_RS09500Not AvailableNegative2264832 - 226543121172.0
bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisbAXG53_RS09505Not AvailableNegative2265428 - 226650140021.4
histidinol-phosphate transaminaseAXG53_RS09510Not AvailableNegative2266498 - 226758038560.3
histidinol dehydrogenaseAXG53_RS09515Not AvailableNegative2267577 - 226887244776.7

Displaying genes 1941 – 1950 of 3954 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.