Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Stenotrophomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Stenotrophomonas |
| Species | Stenotrophomonas sp. KCTC 12332 |
| Strain | strain YM1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838014 bp
Thymine Count
804558 bp
Guanine Count
1399961 bp
Cytosine Count
1499061 bp
Genome Length
4541594 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system lipoprotein tssj | AXG53_RS09020 | Not Available | Positive | 2129094 - 2129705 | 21197.5 |
| type vi secretion system baseplate subunit tssk | AXG53_RS09025 | Not Available | Positive | 2129926 - 2131260 | 49467.1 |
| type ivb secretion system protein icmh/dotu | AXG53_RS20610 | Not Available | Positive | 2131260 - 2132051 | 29355.6 |
| type vi secretion system tip protein tssi/vgrg | AXG53_RS20460 | Not Available | Positive | 2132062 - 2136651 | 167162.0 |
| hypothetical protein | AXG53_RS09040 | Not Available | Positive | 2136648 - 2137292 | 22954.3 |
| is3 family transposase | AXG53_RS19625 | Not Available | Negative | 2137594 - 2138701 | 42939.6 |
| hypothetical protein | AXG53_RS09055 | Not Available | Negative | 2138950 - 2139615 | 24544.5 |
| rhs repeat-associated core domain-containing protein | AXG53_RS20770 | Not Available | Negative | 2139617 - 2142742 | 115573.0 |
| duf6531 domain-containing protein | AXG53_RS20775 | Not Available | Negative | 2142742 - 2144106 | 49116.2 |
| hypothetical protein | AXG53_RS09065 | Not Available | Negative | 2144253 - 2145872 | 59452.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


