Methanobrevibacter olleyae strain YLM1

Gram-positiveRod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanobacteria

Order

Methanobacteriales

Family

Methanobacteriaceae

Genus

Methanobrevibacter

Description

Methanobrevibacter olleyae strain YLM1 is a gram-positive, rod-shaped archaeon notable for its unique metabolic capabilities. This strain is characterized by its single replicon, which is indicative of its streamlined genomic organization. It has been cataloged under the accession number NZ_CP014265.1, providing a reference for further genetic and phenotypic studies. As a member of the Methanobrevibacter genus, strain YLM1 is likely involved in methanogenesis, a process where methane is produced as a metabolic byproduct. This trait is essential for its ecological role in anaerobic environments, where it contributes to the carbon cycle by converting organic materials into methane. The rod shape of Methanobrevibacter olleyae strain YLM1 may enhance its surface area-to-volume ratio, potentially facilitating nutrient uptake and interaction with its environment. The gram-positive nature suggests a robust cell wall structure, which may provide resilience in harsh conditions often present in its natural habitats. In summary, Methanobrevibacter olleyae strain YLM1 exemplifies the diversity of archaeal life forms and highlights the importance of microorganisms in biogeochemical cycles. Its methanogenic capabilities may have significant implications for understanding methane emissions and their impact on climate change, as well as the overall functioning of anaerobic ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanobacteria
OrderMethanobacteriales
FamilyMethanobacteriaceae
GenusMethanobrevibacter
SpeciesMethanobrevibacter olleyae
Strainstrain YLM1

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanobrevibacter olleyae strain YLM1 chromosome, complete

Gene Summary

Adenine Count

803111 bp

Thymine Count

805260 bp

Guanine Count

296504 bp

Cytosine Count

296317 bp

Genome Length

2201192 bp

Protein-coding Genes

1871 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-isopropylmalate dehydratase small subunitYLM1_RS07940Not AvailablePositive1873328 - 187381017778.4
isocitrate/isopropylmalate family dehydrogenaseYLM1_RS07945Not AvailablePositive1873860 - 187484935592.4
glycosyltransferase family 2 proteinYLM1_RS07950Not AvailablePositive1874949 - 187594438947.2
6,7-dimethyl-8-ribityllumazine synthaseYLM1_RS07955Not AvailablePositive1876391 - 187682215685.2
methanogenesis marker protein 11YLM1_RS07960Not AvailablePositive1877026 - 187796434218.2
trna dihydrouridine synthase dusbYLM1_RS07965Not AvailableNegative1878096 - 187907036357.1
helix-turn-helix domain-containing proteinYLM1_RS07970Not AvailablePositive1879338 - 187972115016.4
nadp-dependent oxidoreductaseYLM1_RS07975Not AvailablePositive1879808 - 188081537555.1
nitroreductase family proteinYLM1_RS07980Not AvailableNegative1880851 - 188157328347.8
3,4-dihydroxy-2-butanone-4-phosphate synthaseYLM1_RS07985Not AvailablePositive1882256 - 188289723129.7

Displaying genes 1631 – 1640 of 1913 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.