Agrobacterium tumefaciens strain S33

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens strain S33 is a Gram-negative, rod-shaped bacterium that exhibits motility and possesses flagella. It is categorized as an aerobe, requiring oxygen for growth, and thrives optimally at a temperature of 25°C, fitting within a mesophilic temperature range. This strain has two replicons and two membranes, a characteristic typical of many Gram-negative bacteria. Strain S33 is free-living and has a wide range of hosts, primarily within the Viridiplantae kingdom. Notable hosts include Triticum aestivum (wheat), Solanum tuberosum (potato), Solanum lycopersicum (tomato), Oryza sativa (rice), Arabidopsis, and Glycine max (soybean), among others. This diverse host range highlights its ecological versatility and potential impacts on agricultural systems. A significant health effect associated with Agrobacterium tumefaciens strain S33 is its role in causing tumors in plants, specifically leading to crown gall disease. The bacterium induces crown gall tumors, resulting in the formation of abnormal growths in afflicted plants. These galls can negatively impact plant health and yield, making the understanding of this strain crucial for managing agricultural diseases. In summary, Agrobacterium tumefaciens strain S33 is an influential bacterium in plant pathology, particularly due to its ability to induce crown gall disease in a variety of economically important crops. This underscores the importance of monitoring and managing its presence in agricultural settings to mitigate adverse effects on plant health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
Strainstrain S33

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens strain S33
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Viridiplantae, Triticum aestivum, Solanum tuberosum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens strain S33 chromosome circular, complete

Gene Summary

Adenine Count

512858 bp

Thymine Count

510392 bp

Guanine Count

737402 bp

Cytosine Count

737282 bp

Genome Length

2497934 bp

Protein-coding Genes

2254 genes

Non-Coding Genes

21 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ferredoxin fdxaAWN88_RS18615Not AvailableNegative1545073 - 154541112533.8
rna-binding s4 domain-containing proteinAWN88_RS18620Not AvailableNegative1545570 - 154598615631.5
helicase-related proteinAWN88_RS18625Not AvailableNegative1545991 - 1549074113115.0
ubiquinone biosynthesis hydroxylaseAWN88_RS18630Not AvailableNegative1549533 - 155077744807.1
acyl-coa thioesterase iiAWN88_RS18635Not AvailablePositive1550834 - 155171833135.6
p-ii family nitrogen regulatorAWN88_RS18640Not AvailablePositive1551930 - 155228012569.3
ammonium transporterAWN88_RS18645Not AvailablePositive1552310 - 155365646573.7
dna translocase ftskAWN88_RS18650Not AvailablePositive1553930 - 155659396164.7
outer membrane lipoprotein carrier protein lolaAWN88_RS18655Not AvailablePositive1556641 - 155736626690.9
exodeoxyribonuclease iiiAWN88_RS18660Not AvailablePositive1557525 - 155832830581.8

Displaying genes 3841 – 3850 of 5199 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
TumorsCausesPMC177831
Crown gall diseaseCausesPMC2241609
Crown gall diseaseCausesPMC2653234
Crown gall diseaseCausesPMC11575935
Crown and cane gall symptomsCausesPMC12602688
Crown and cane gallsCausesPMC12602688
Crown gall diseaseCausesPMC9343901
Crown gallCausesPMC12030312
Crown-gall diseaseCausesPMC7248198
Crown gall tumorsCausesPMC8087989

Displaying health effects 1 – 10 of 11 in total