Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain S33 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain S33 chromosome circular, complete
Gene Summary
Adenine Count
512858 bp
Thymine Count
510392 bp
Guanine Count
737402 bp
Cytosine Count
737282 bp
Genome Length
2497934 bp
Protein-coding Genes
2254 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-formyltetrahydrofolate cyclo-ligase | AWN88_RS08090 | Not Available | Positive | 1812805 - 1813422 | 22170.8 |
| tigr00282 family metallophosphoesterase | AWN88_RS08095 | Not Available | Positive | 1813495 - 1814319 | 29605.2 |
| mbl fold metallo-hydrolase | AWN88_RS08100 | Not Available | Positive | 1814432 - 1815274 | 30730.3 |
| pyridoxamine 5'-phosphate oxidase family protein | AWN88_RS08105 | Not Available | Negative | 1815312 - 1815815 | 18693.9 |
| yebc/pmpr family dna-binding transcriptional regulator | AWN88_RS08110 | Not Available | Positive | 1816014 - 1816760 | 26861.6 |
| llm class flavin-dependent oxidoreductase | AWN88_RS08115 | Not Available | Negative | 1816817 - 1817818 | 36560.9 |
| crossover junction endodeoxyribonuclease ruvc | AWN88_RS08120 | Not Available | Positive | 1818042 - 1818554 | 18167.2 |
| holliday junction branch migration protein ruva | AWN88_RS08125 | Not Available | Positive | 1818584 - 1819201 | 21346.8 |
| holliday junction branch migration dna helicase ruvb | AWN88_RS08130 | Not Available | Positive | 1819324 - 1820364 | 38199.3 |
| duf2945 domain-containing protein | AWN88_RS08135 | Not Available | Positive | 1820417 - 1820635 | 8107.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


