Methanogenic archaeon ISO4-H5

Kingdom

Methanobacteriati

Phylum

Thermoplasmatota

Class

Thermoplasmata

Order

Family

Genus

Description

Methanogenic archaeon ISO4-H5 is characterized by having a single replicon, which is an important feature for its genetic organization and replication. The genome of ISO4-H5 is documented under the accession number NZ_CP014214.1. This accession provides a reference for researchers studying the specific genetic and metabolic pathways of this archaeon. Methanogens, including ISO4-H5, play a crucial role in the global carbon cycle, particularly in anaerobic environments such as wetlands, sediments, and the gastrointestinal tracts of ruminant animals. Their primary function is the conversion of organic substrates into methane, a process that not only contributes to greenhouse gas emissions but also serves as a key step in nutrient recycling in these ecosystems. The presence of ISO4-H5 in its respective habitat highlights its ecological importance, as methanogens are vital for maintaining the balance of anaerobic microbial communities. By producing methane, ISO4-H5 contributes to energy flow within these communities and influences the overall dynamics of carbon cycling. Understanding the traits and functions of ISO4-H5 can provide insights into the ecological roles of methanogens and their impact on environmental processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanogenic archaeon ISO4-H5, complete genome.

Gene Summary

Adenine Count

447866 bp

Thymine Count

443484 bp

Guanine Count

524169 bp

Cytosine Count

522364 bp

Genome Length

1937883 bp

Protein-coding Genes

1822 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseAR505_RS02625Not AvailablePositive499835 - 50113046735.1
shikimate kinaseAR505_RS02630Not AvailablePositive501127 - 50194228986.7
3-phosphoshikimate 1-carboxyvinyltransferaseAR505_RS02635Not AvailablePositive501944 - 50326646698.4
fic family proteinAR505_RS02640Not AvailableNegative503360 - 50463749604.7
hypothetical proteinAR505_RS02645Not AvailablePositive504773 - 50518315470.6
prephenate dehydratase domain-containing proteinAR505_RS02650Not AvailableNegative505190 - 50575320737.9
rna-guided endonuclease tnpb family proteinAR505_RS02655Not AvailablePositive506173 - 50740847810.8
abc-f family atp-binding cassette domain-containing proteinAR505_RS02660Not AvailableNegative507579 - 50939368804.0
hypothetical proteinAR505_RS02665Not AvailablePositive509522 - 51045734931.7
hypothetical proteinAR505_RS02670Not AvailablePositive510566 - 51107219119.8

Displaying genes 531 – 540 of 1875 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.