Isoptericola dokdonensis DS-3

Gram-positiveBacilli

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Promicromonosporaceae

Genus

Isoptericola

Description

Isoptericola dokdonensis DS-3 is a Gram-positive bacterium characterized by its bacilli shape. This organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The strain is cataloged under the accession number NZ_CP014209.1, which allows for further research and reference in genomic studies. The classification of Isoptericola dokdonensis within the broader microbial context suggests its potential roles in ecological processes. Gram-positive bacteria are known for their thick peptidoglycan layer, which can provide advantages in certain environments, such as resistance to desiccation and the ability to form spores. These traits may enable Isoptericola dokdonensis to survive in challenging conditions, possibly influencing its ecological niche. Overall, the specific traits of Isoptericola dokdonensis DS-3, including its Gram-positive nature and bacilli morphology, suggest that it may play a significant role in its habitat, potentially contributing to nutrient cycling or other ecological functions within its environment. Further investigation into its ecological interactions and metabolic capabilities could provide insights into its significance in microbiological research and environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyPromicromonosporaceae
GenusIsoptericola
SpeciesIsoptericola dokdonensis
StrainDS-3

Profile

Physiology
Gram staining propertiesPositive
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Isoptericola dokdonensis DS-3 chromosome, complete genome.

Gene Summary

Adenine Count

501704 bp

Thymine Count

500527 bp

Guanine Count

1415494 bp

Cytosine Count

1409247 bp

Genome Length

3826972 bp

Protein-coding Genes

3405 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rhamnulokinase family proteinI598_RS04390Not AvailableNegative915963 - 91736949361.0
bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenaseI598_RS04395Not AvailableNegative917366 - 91940270773.8
l-rhamnose isomeraseI598_RS04400Not AvailableNegative919438 - 92060442259.7
phosphonatase-like hydrolaseI598_RS04405Not AvailableNegative920782 - 92144122737.2
tigr03364 family fad-dependent oxidoreductaseI598_RS04410Not AvailableNegative921506 - 92266940504.6
gntr family transcriptional regulatorI598_RS04415Not AvailablePositive922750 - 92348726082.2
zinc-binding dehydrogenaseI598_RS04420Not AvailableNegative923511 - 92456635175.2
phosphonate abc transporter, permease protein phneI598_RS04425Not AvailableNegative924542 - 92618255687.9
phosphonate abc transporter atp-binding proteinI598_RS04430Not AvailableNegative926179 - 92695527830.9
phosphate/phosphite/phosphonate abc transporter substrate-binding proteinI598_RS04435Not AvailableNegative926961 - 92793532903.9

Displaying genes 931 – 940 of 3498 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.