Isoptericola dokdonensis DS-3

Gram-positiveBacilli

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Promicromonosporaceae

Genus

Isoptericola

Description

Isoptericola dokdonensis DS-3 is a Gram-positive bacterium characterized by its bacilli shape. This organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The strain is cataloged under the accession number NZ_CP014209.1, which allows for further research and reference in genomic studies. The classification of Isoptericola dokdonensis within the broader microbial context suggests its potential roles in ecological processes. Gram-positive bacteria are known for their thick peptidoglycan layer, which can provide advantages in certain environments, such as resistance to desiccation and the ability to form spores. These traits may enable Isoptericola dokdonensis to survive in challenging conditions, possibly influencing its ecological niche. Overall, the specific traits of Isoptericola dokdonensis DS-3, including its Gram-positive nature and bacilli morphology, suggest that it may play a significant role in its habitat, potentially contributing to nutrient cycling or other ecological functions within its environment. Further investigation into its ecological interactions and metabolic capabilities could provide insights into its significance in microbiological research and environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyPromicromonosporaceae
GenusIsoptericola
SpeciesIsoptericola dokdonensis
StrainDS-3

Profile

Physiology
Gram staining propertiesPositive
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Isoptericola dokdonensis DS-3 chromosome, complete genome.

Gene Summary

Adenine Count

501704 bp

Thymine Count

500527 bp

Guanine Count

1415494 bp

Cytosine Count

1409247 bp

Genome Length

3826972 bp

Protein-coding Genes

3405 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Helix-turn-helix dna binding domain proteinI598_RS09495Not AvailableNegative2037977 - 203874727657.4
Rusa-like proteinI598_RS09500Not AvailableNegative2039078 - 203956017336.7
Helix-turn-helix dna binding domain proteinI598_RS09505Not AvailableNegative2039553 - 203987911995.2
Rect-like ss dna binding proteinI598_RS09510Not AvailableNegative2039876 - 204064327770.9
Rece-like exonucleaseI598_RS09515Not AvailableNegative2040640 - 204164737259.3
Helix-turn-helix dna binding domain proteinI598_RS17620Not AvailableNegative2041644 - 20418718057.71
hypothetical proteinI598_RS17625Not AvailableNegative2041868 - 204219111426.2
Helix-turn-helix dna binding domain proteinI598_RS09530Not AvailableNegative2042194 - 20424398309.86
Immunity repressorI598_RS09535Not AvailablePositive2042605 - 204297913357.9
AttrNot AvailableNot AvailablePositive2042832 - 2042844Not Available

Displaying genes 31 – 40 of 3498 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.