Isoptericola dokdonensis DS-3

Gram-positiveBacilli

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Promicromonosporaceae

Genus

Isoptericola

Description

Isoptericola dokdonensis DS-3 is a Gram-positive bacterium characterized by its bacilli shape. This organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The strain is cataloged under the accession number NZ_CP014209.1, which allows for further research and reference in genomic studies. The classification of Isoptericola dokdonensis within the broader microbial context suggests its potential roles in ecological processes. Gram-positive bacteria are known for their thick peptidoglycan layer, which can provide advantages in certain environments, such as resistance to desiccation and the ability to form spores. These traits may enable Isoptericola dokdonensis to survive in challenging conditions, possibly influencing its ecological niche. Overall, the specific traits of Isoptericola dokdonensis DS-3, including its Gram-positive nature and bacilli morphology, suggest that it may play a significant role in its habitat, potentially contributing to nutrient cycling or other ecological functions within its environment. Further investigation into its ecological interactions and metabolic capabilities could provide insights into its significance in microbiological research and environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyPromicromonosporaceae
GenusIsoptericola
SpeciesIsoptericola dokdonensis
StrainDS-3

Profile

Physiology
Gram staining propertiesPositive
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Isoptericola dokdonensis DS-3 chromosome, complete genome.

Gene Summary

Adenine Count

501704 bp

Thymine Count

500527 bp

Guanine Count

1415494 bp

Cytosine Count

1409247 bp

Genome Length

3826972 bp

Protein-coding Genes

3405 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii toxin-antitoxin system pemk/mazf family toxinI598_RS01065Not AvailableNegative243115 - 24364819499.9
circularly permuted type 2 atp-grasp proteinI598_RS01070Not AvailablePositive243765 - 24537858442.2
alpha-e domain-containing proteinI598_RS01075Not AvailablePositive245372 - 24630434471.9
transglutaminase family proteinI598_RS01080Not AvailablePositive246301 - 24714329985.1
enoyl-coa hydratase/isomerase family proteinI598_RS01085Not AvailableNegative247156 - 24762915737.8
hypothetical proteinI598_RS17795Not AvailableNegative247715 - 2478946136.96
hypothetical proteinI598_RS01095Not AvailableNegative247946 - 24835314780.2
hypothetical proteinI598_RS01100Not AvailableNegative248359 - 24876014601.0
hypothetical proteinI598_RS01105Not AvailablePositive248995 - 24977128032.1
hypothetical proteinI598_RS01110Not AvailablePositive249902 - 2500967480.56

Displaying genes 261 – 270 of 3498 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.