Isoptericola dokdonensis DS-3

Gram-positiveBacilli

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Promicromonosporaceae

Genus

Isoptericola

Description

Isoptericola dokdonensis DS-3 is a Gram-positive bacterium characterized by its bacilli shape. This organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The strain is cataloged under the accession number NZ_CP014209.1, which allows for further research and reference in genomic studies. The classification of Isoptericola dokdonensis within the broader microbial context suggests its potential roles in ecological processes. Gram-positive bacteria are known for their thick peptidoglycan layer, which can provide advantages in certain environments, such as resistance to desiccation and the ability to form spores. These traits may enable Isoptericola dokdonensis to survive in challenging conditions, possibly influencing its ecological niche. Overall, the specific traits of Isoptericola dokdonensis DS-3, including its Gram-positive nature and bacilli morphology, suggest that it may play a significant role in its habitat, potentially contributing to nutrient cycling or other ecological functions within its environment. Further investigation into its ecological interactions and metabolic capabilities could provide insights into its significance in microbiological research and environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyPromicromonosporaceae
GenusIsoptericola
SpeciesIsoptericola dokdonensis
StrainDS-3

Profile

Physiology
Gram staining propertiesPositive
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Isoptericola dokdonensis DS-3 chromosome, complete genome.

Gene Summary

Adenine Count

501704 bp

Thymine Count

500527 bp

Guanine Count

1415494 bp

Cytosine Count

1409247 bp

Genome Length

3826972 bp

Protein-coding Genes

3405 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dak2 domain-containing proteinI598_RS00665Not AvailablePositive147513 - 14924357947.3
atp-dependent dna helicase recgI598_RS00670Not AvailablePositive149240 - 15147179145.7
16s rrna (guanine(966)-n(2))-methyltransferase rsmdI598_RS00675Not AvailablePositive151514 - 15213421236.2
pantetheine-phosphate adenylyltransferaseI598_RS00680Not AvailablePositive152157 - 15264817051.6
atp synthase f0 subunit bI598_RS00685Not AvailablePositive152660 - 15321419863.0
duf177 domain-containing proteinI598_RS00690Not AvailablePositive153407 - 15395819611.1
50s ribosomal protein l32I598_RS00695Not AvailablePositive153961 - 1541557035.48
ribonuclease iiiI598_RS00700Not AvailablePositive154157 - 15488525666.4
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyaseI598_RS00705Not AvailablePositive154878 - 15581033694.2
nad(p)-dependent oxidoreductaseI598_RS00710Not AvailableNegative155848 - 15679233372.8

Displaying genes 181 – 190 of 3498 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.