Isoptericola dokdonensis DS-3

Gram-positiveBacilli

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Promicromonosporaceae

Genus

Isoptericola

Description

Isoptericola dokdonensis DS-3 is a Gram-positive bacterium characterized by its bacilli shape. This organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The strain is cataloged under the accession number NZ_CP014209.1, which allows for further research and reference in genomic studies. The classification of Isoptericola dokdonensis within the broader microbial context suggests its potential roles in ecological processes. Gram-positive bacteria are known for their thick peptidoglycan layer, which can provide advantages in certain environments, such as resistance to desiccation and the ability to form spores. These traits may enable Isoptericola dokdonensis to survive in challenging conditions, possibly influencing its ecological niche. Overall, the specific traits of Isoptericola dokdonensis DS-3, including its Gram-positive nature and bacilli morphology, suggest that it may play a significant role in its habitat, potentially contributing to nutrient cycling or other ecological functions within its environment. Further investigation into its ecological interactions and metabolic capabilities could provide insights into its significance in microbiological research and environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyPromicromonosporaceae
GenusIsoptericola
SpeciesIsoptericola dokdonensis
StrainDS-3

Profile

Physiology
Gram staining propertiesPositive
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Isoptericola dokdonensis DS-3 chromosome, complete genome.

Gene Summary

Adenine Count

501704 bp

Thymine Count

500527 bp

Guanine Count

1415494 bp

Cytosine Count

1409247 bp

Genome Length

3826972 bp

Protein-coding Genes

3405 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4233 domain-containing proteinI598_RS05435Not AvailableNegative1142122 - 114257115977.9
mdr family mfs transporterI598_RS05440Not AvailableNegative1142568 - 114423258084.7
tetr/acrr family transcriptional regulatorI598_RS05445Not AvailableNegative1144305 - 114490721911.0
dihydroxyacetone kinase phosphoryl donor subunit dhamI598_RS05450Not AvailableNegative1144964 - 114570423999.6
dihydroxyacetone kinase subunit dhalI598_RS05455Not AvailableNegative1145716 - 114636921687.7
dihydroxyacetone kinase subunit dhakI598_RS05460Not AvailableNegative1146363 - 114735833817.2
folylpolyglutamate synthase/dihydrofolate synthase family proteinI598_RS05465Not AvailableNegative1147444 - 114885949946.3
isoleucine--trna ligaseI598_RS05470Not AvailableNegative1148856 - 1152173121821.0
mfs transporterI598_RS05475Not AvailablePositive1152501 - 115379942227.1
lyse family translocatorI598_RS05480Not AvailablePositive1153839 - 115447721534.7

Displaying genes 1141 – 1150 of 3498 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.