Microbulbifer aggregans strain CCB-MM1

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Cellvibrionales

Family

Microbulbiferaceae

Genus

Microbulbifer

Description

Microbulbifer aggregans strain CCB-MM1 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain is classified as mesophilic, with an optimal growth temperature of 29°C, indicating it thrives in moderate temperature conditions. Genetic analysis reveals that it possesses a single replicon, suggesting a streamlined genome organization. The strain CCB-MM1 is part of the Microbulbifer genus, which is known for its role in the degradation of organic matter in marine environments. Given its aerobic requirement, M. aggregans strain CCB-MM1 likely participates in processes that involve the breakdown of complex organic compounds in oxygent-rich environments. This ability to metabolize organic material can contribute to nutrient cycling in its ecological niche, particularly within marine sediments. The accession number for this strain is NZ_CP014143.1, which provides a reference for genomic and taxonomic studies, facilitating further research into its metabolic capabilities and ecological roles. Understanding the characteristics of M. aggregans strain CCB-MM1 can be crucial for insights into microbial diversity and the functioning of ecosystems where such organisms play a pivotal role in organic matter decomposition and nutrient availability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCellvibrionales
FamilyMicrobulbiferaceae
GenusMicrobulbifer
SpeciesMicrobulbifer aggregans
Strainstrain CCB-MM1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbulbifer aggregans strain CCB-MM1 chromosome, complete

Gene Summary

Adenine Count

797756 bp

Thymine Count

792372 bp

Guanine Count

1137482 bp

Cytosine Count

1136716 bp

Genome Length

3864326 bp

Protein-coding Genes

3301 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-acetylglucosamine kinaseAUP74_RS00305Not AvailableNegative67948 - 6889532820.3
phosphate abc transporter substrate-binding proteinAUP74_RS00310Not AvailablePositive69372 - 7071849190.0
duf6279 family lipoproteinAUP74_RS00315Not AvailablePositive70878 - 7176834990.5
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeAUP74_RS00320Not AvailablePositive71883 - 7315446179.1
lysophospholipid acyltransferase family proteinAUP74_RS00325Not AvailableNegative73358 - 7503462876.5
udp-2,3-diacylglucosamine diphosphataseAUP74_RS00330Not AvailableNegative75031 - 7582230113.7
hypothetical proteinAUP74_RS00335Not AvailableNegative75994 - 7679129803.7
hypothetical proteinAUP74_RS00340Not AvailableNegative76791 - 7816451503.8
cpbp family intramembrane glutamic endopeptidaseAUP74_RS00345Not AvailablePositive78523 - 7917624785.9
duf1820 family proteinAUP74_RS00350Not AvailableNegative79327 - 7965912693.2

Displaying genes 61 – 70 of 3396 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.