Microbulbifer aggregans strain CCB-MM1

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Cellvibrionales

Family

Microbulbiferaceae

Genus

Microbulbifer

Description

Microbulbifer aggregans strain CCB-MM1 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain is classified as mesophilic, with an optimal growth temperature of 29°C, indicating it thrives in moderate temperature conditions. Genetic analysis reveals that it possesses a single replicon, suggesting a streamlined genome organization. The strain CCB-MM1 is part of the Microbulbifer genus, which is known for its role in the degradation of organic matter in marine environments. Given its aerobic requirement, M. aggregans strain CCB-MM1 likely participates in processes that involve the breakdown of complex organic compounds in oxygent-rich environments. This ability to metabolize organic material can contribute to nutrient cycling in its ecological niche, particularly within marine sediments. The accession number for this strain is NZ_CP014143.1, which provides a reference for genomic and taxonomic studies, facilitating further research into its metabolic capabilities and ecological roles. Understanding the characteristics of M. aggregans strain CCB-MM1 can be crucial for insights into microbial diversity and the functioning of ecosystems where such organisms play a pivotal role in organic matter decomposition and nutrient availability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCellvibrionales
FamilyMicrobulbiferaceae
GenusMicrobulbifer
SpeciesMicrobulbifer aggregans
Strainstrain CCB-MM1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbulbifer aggregans strain CCB-MM1 chromosome, complete

Gene Summary

Adenine Count

797756 bp

Thymine Count

792372 bp

Guanine Count

1137482 bp

Cytosine Count

1136716 bp

Genome Length

3864326 bp

Protein-coding Genes

3301 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system inner membrane protein gspfAUP74_RS12330Not AvailablePositive2835373 - 283659043922.5
type ii secretion system major pseudopilin gspgAUP74_RS12335Not AvailablePositive2836666 - 283709415403.5
type ii secretion system proteinAUP74_RS12340Not AvailablePositive2837115 - 283768720534.7
type ii secretion system minor pseudopilin gspiAUP74_RS12345Not AvailablePositive2837680 - 283805113923.8
type ii secretion system minor pseudopilin gspjAUP74_RS12350Not AvailablePositive2838048 - 283880928053.1
type ii secretion system minor pseudopilin gspkAUP74_RS12355Not AvailablePositive2838809 - 283981937016.6
type ii secretion system protein gsplAUP74_RS12360Not AvailablePositive2839831 - 284114447705.7
type ii secretion system protein gspmAUP74_RS12365Not AvailablePositive2841184 - 284166917945.7
acetyltransferaseAUP74_RS12370Not AvailablePositive2841870 - 284214210458.2
duf2788 domain-containing proteinAUP74_RS12375Not AvailablePositive2842346 - 28425497433.41

Displaying genes 2471 – 2480 of 3396 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.