Vibrio diabolicus strain FDAARGOS_99

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio diabolicus strain FDAARGOS_99 is a gram-negative bacterium primarily found in deep-sea marine environments. This strain is characterized by its possession of two replicons, which are essential for its genetic stability and adaptability. Notably, Vibrio diabolicus is classified as non-pathogenic, indicating that it does not pose a threat to human health or cause disease in other organisms. The genetic material of this strain is documented under two accession numbers: NZ_CP014133.1 and NZ_CP014134.1. These accessions provide a basis for further study and understanding of its genomic features and potential applications in marine microbiology. The ecological significance of Vibrio diabolicus lies in its adaptation to deep-sea habitats, where it likely plays a role in nutrient cycling and the breakdown of organic matter in these extreme environments. Its non-pathogenic nature suggests that it may contribute positively to marine ecosystems, potentially aiding in the maintenance of microbial diversity and stability in deep-sea communities. Understanding the characteristics and ecological roles of Vibrio diabolicus can enhance our knowledge of marine microbiomes and their functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio diabolicus
Strainstrain FDAARGOS_99

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio diabolicus strain FDAARGOS_99
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdeep sea; Marine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNon-pathogenic

Genome Summary

Vibrio diabolicus strain FDAARGOS_99 chromosome 2, complete

Gene Summary

Adenine Count

518136 bp

Thymine Count

517883 bp

Guanine Count

420026 bp

Cytosine Count

419153 bp

Genome Length

1875198 bp

Protein-coding Genes

1635 genes

Non-Coding Genes

25 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion system needle filament subunit sctfAL468_RS10145Not AvailablePositive175337 - 1755859111.72
yscg family type iii secretion system chaperoneAL468_RS10150Not AvailablePositive175589 - 17594812885.3
yopr family t3ss polymerization control proteinAL468_RS10155Not AvailablePositive175945 - 17658023873.4
scti family type iii secretion system inner rod subunit vsciAL468_RS10160Not AvailablePositive176589 - 17693312773.1
type iii secretion system inner membrane ring lipoprotein sctjAL468_RS10165Not AvailablePositive176933 - 17767927494.5
sctk family type iii secretion system sorting platform protein vsckAL468_RS10170Not AvailablePositive177672 - 17833725652.2
hrpe/yscl family type iii secretion apparatus proteinAL468_RS10175Not AvailablePositive178316 - 17895423484.0
cest family type iii secretion system chaperoneAL468_RS10180Not AvailablePositive179086 - 17957117890.2
vops family t3ss effector adenosine monophosphate-protein transferaseAL468_RS10185Not AvailablePositive179575 - 18073841477.8
type iii secretion system chaperoneAL468_RS10190Not AvailablePositive181003 - 18144916831.1

Displaying genes 1911 – 1920 of 4698 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.