Vibrio alginolyticus strain FDAARGOS_108

Motilefacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio alginolyticus strain FDAARGOS_108 is a marine, gram-negative bacterium characterized as a facultative anaerobe. It possesses flagella, which contribute to its mobility in aquatic environments. The optimal temperature for growth of this strain is 30°C. It is notable for having a single replicon. This strain has been associated with a variety of hosts, including Homo sapiens, Sparus aurata (European sea bass), various mollusks, and Penaeus vannamei (Pacific white shrimp). In humans, Vibrio alginolyticus can cause a range of health effects, including septicaemia, vibriosis, gastroenteritis, and skin and muscle necrosis. In aquatic organisms, it is known to inflict diseases on farmed shrimp, fish, and mollusks, highlighting its significance in both human health and aquaculture. The presence of Vibrio alginolyticus in marine ecosystems suggests its role as both a pathogen and a natural inhabitant of these environments. Its ability to thrive in various hosts and its pathogenic potential underscore the importance of monitoring this bacterium in marine settings, particularly in the context of food safety and the health of marine life. Understanding its ecological interactions and pathogenic mechanisms can inform strategies to mitigate its impact on both human health and aquaculture industries.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio alginolyticus
Strainstrain FDAARGOS_108

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Vibrio alginolyticus strain FDAARGOS_108
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperature30
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Homo sapiens, Sparus aurata, Mollusca
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio alginolyticus strain FDAARGOS_108


Gene Summary

Adenine Count

501322 bp

Thymine Count

501440 bp

Guanine Count

403042 bp

Cytosine Count

404790 bp

Genome Length

1810594 bp

Protein-coding Genes

1586 genes

Non-Coding Genes

16 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system baseplate subunit tssfAL539_RS17925Not AvailablePositive13308 - 1513169814.0
type vi secretion system baseplate subunit tssgAL539_RS17930Not AvailablePositive15128 - 1609335867.2
type vi secretion system atpase tsshAL539_RS17935Not AvailablePositive16104 - 1867193934.2
hcp family type vi secretion system effectorAL539_RS17940Not AvailablePositive18880 - 1935917759.1
type vi secretion system tip protein tssi/vgrgAL539_RS17945Not AvailablePositive19409 - 2124468551.5
paar domain-containing proteinAL539_RS17950Not AvailablePositive21256 - 215469319.49
nad/nadp transhydrogenase subunit betaAL539_RS17955Not AvailablePositive21547 - 2238631391.4
exonuclease sbccd subunit dAL539_RS17960Not AvailablePositive22748 - 2388142964.4
aaa family atpaseAL539_RS17965Not AvailablePositive23891 - 26947114137.0
cystatin domain-containing proteinAL539_RS17970Not AvailableNegative27006 - 2738613818.4

Displaying genes 11 – 20 of 1602 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Skin and muscle necrosisCausesPMC10724927
VibriosisCausesPMC8416912
GastroenteritisCausesPMC8416912
SepticaemiaCausesPMC8416912
Diseases in farmed shrimp, fish, and molluscsCausesPMC12075680

Displaying health effects 1 – 5 of 5 in total