Vibrio fluvialis strain ATCC 33809

Gram-negativeMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio fluvialis strain ATCC 33809 is a Gram-negative, aerobic bacterium primarily found in coastal, estuarine, freshwater, and marine environments. This strain exhibits mobility, which may contribute to its ability to inhabit diverse aquatic ecosystems. It is known to infect humans, causing health issues such as vibriosis and gastroenteritis. Infections can lead to diarrheal outbreaks characterized by both watery and bloody diarrhea, highlighting its pathogenic potential. The strain's single replicon structure is indicative of its genomic organization, which can be significant for its adaptability and survival in various environments. Given its ecological niche in aquatic systems, V. fluvialis can serve as an indicator of water quality and the potential presence of pathogens in these habitats. As a member of the Vibrio genus, V. fluvialis emphasizes the importance of monitoring coastal and estuarine waters for the presence of pathogenic bacteria that can impact human health, particularly in regions where recreational water activities occur. The presence of this strain in fresh and marine waters underscores the need for public health measures to prevent gastroenteritis outbreaks associated with contaminated water sources.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio fluvialis
Strainstrain ATCC 33809

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio fluvialis strain ATCC 33809
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcoastal environments; estuarine environments; Fresh water; Marine
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityAnimal; Human

Genome Summary

Vibrio fluvialis strain ATCC 33809 chromosome 1, complete

Gene Summary

Adenine Count

420436 bp

Thymine Count

420326 bp

Guanine Count

413619 bp

Cytosine Count

417514 bp

Genome Length

1671895 bp

Protein-coding Genes

1544 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional succinylornithine transaminase/acetylornithine transaminaseAL536_RS29230Not AvailableNegative1386147 - 138736143000.3
glxa family transcriptional regulatorAL536_RS29235Not AvailableNegative1387494 - 138848036444.4
n-acetyl-d-glu racemase dgcaAL536_RS29240Not AvailableNegative1389135 - 139012135918.4
n-acetyltransferase dgcnAL536_RS29245Not AvailableNegative1390114 - 139113636062.2
abc transporter permeaseAL536_RS29250Not AvailableNegative1391220 - 139193927103.6
abc transporter permeaseAL536_RS29255Not AvailableNegative1391950 - 139266626008.5
transporter substrate-binding domain-containing proteinAL536_RS29260Not AvailableNegative1392728 - 139350427955.4
lysr family transcriptional regulatorAL536_RS29265Not AvailablePositive1393735 - 139471836519.0
dj-1/pfpi family proteinAL536_RS29270Not AvailableNegative1394748 - 139535020972.3
gnat family proteinAL536_RS29275Not AvailableNegative1395412 - 139591218853.4

Displaying genes 1301 – 1310 of 1544 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

313 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da

Displaying 1–10 of 313 metabolites

Health Effects

Health ConditionRelationReference
Diarrheal outbreaksCausesPMC10882959
VibriosisCausesPMC8416912
GastroenteritisCausesPMC8416912
DiarrhoeaCausesPMC8416912
Acute gastroenteritisCausesPMC8942032
Watery diarrhoeaCausesPMC8942032
Bloody diarrhoeaCausesPMC8942032
Acute gastroenteritisCausesPMC11027346

Displaying health effects 1 – 8 of 8 in total