Serratia liquefaciens strain FDAARGOS_125

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Serratia

Description

Serratia liquefaciens strain FDAARGOS_125 is a Gram-negative bacterium characterized by its rod shape and aerobic oxygen requirement. This species is notable for possessing flagella, which contribute to its motility in various environments. The strain is primarily found in soil habitats, indicating its ecological role in terrestrial ecosystems. From a genomic perspective, Serratia liquefaciens strain FDAARGOS_125 has a single replicon, which is significant for its genetic stability and replication processes. The strain has been associated with the host Camellia reticulata, suggesting potential interactions with this plant species. This relationship could imply that Serratia liquefaciens may play a role in the rhizosphere, potentially influencing plant health or nutrient cycling. The accession number for this strain is NZ_CP014017.2, which provides a reference for its genomic data and further study. Understanding the traits of Serratia liquefaciens strain FDAARGOS_125 can contribute to insights into microbial diversity in soil environments and the specific roles such bacteria may play in supporting plant life, particularly in association with Camellia reticulata.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusSerratia
SpeciesSerratia liquefaciens
Strainstrain FDAARGOS_125

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Serratia liquefaciens strain FDAARGOS_125
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Camellia reticulata
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Serratia liquefaciens strain FDAARGOS_125 chromosome, complete

Gene Summary

Adenine Count

1178474 bp

Thymine Count

1182158 bp

Guanine Count

1463032 bp

Cytosine Count

1461076 bp

Genome Length

5284740 bp

Protein-coding Genes

4780 genes

Non-Coding Genes

200 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
zn-dependent oxidoreductaseAL485_RS19300Not AvailableNegative4029347 - 403036336848.3
d-mannonate dehydratase mandAL485_RS19305Not AvailableNegative4030378 - 403159245818.8
lipid kinase yegsAL485_RS19310Not AvailableNegative4031805 - 403272232497.6
trna 5-hydroxyuridine modification protein yegqAL485_RS19315Not AvailableNegative4033196 - 403454850532.5
yegp family proteinAL485_RS19320Not AvailableNegative4034726 - 403506412156.2
antitoxinAL485_RS19325Not AvailablePositive4035416 - 403567910091.9
type ii toxin-antitoxin system vapc family toxinAL485_RS19330Not AvailablePositive4035682 - 403606814078.1
two-component system response regulator baerAL485_RS19335Not AvailableNegative4036073 - 403678927349.0
two-component system sensor histidine kinase baesAL485_RS19340Not AvailableNegative4036789 - 403817151550.7
mfs transporterAL485_RS19345Not AvailableNegative4038171 - 403960151460.1

Displaying genes 3861 – 3870 of 4980 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

322 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da

Displaying 1–10 of 322 metabolites

Health Effects

No health effects information available for this bacterium.