Aerococcus urinaeequi strain USDA-ARS-USMARC-56713

sphereaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Aerococcaceae

Genus

Aerococcus

Description

Aerococcus urinaeequi strain USDA-ARS-USMARC-56713 is a Gram-positive, non-motile sphere-shaped bacterium. It exhibits a characteristic cell arrangement in pairs and is classified as aerobic, indicating that it requires oxygen for growth. This strain is mesophilic, with an optimal growth temperature of 29°C. Aerococcus urinaeequi has been identified in various hosts, including Homo sapiens (humans), Gallus gallus (chickens), Sus scrofa (pigs), and Anser (geese). Its pathogenicity is primarily associated with animals, suggesting a role in animal health and disease. The strain is non-spore-forming and has a single replicon, which may reflect its stable genetic structure. The presence of true flagella, despite being non-motile, is noteworthy; however, the specific implications of this trait in the ecological context of the bacterium are not detailed in the provided information. Understanding the ecological role of Aerococcus urinaeequi may provide insights into its interactions with its hosts and potential implications for animal health. Given its association with multiple animal species, further studies could elucidate its pathogenic mechanisms and its impact on animal microbiomes, potentially influencing animal husbandry practices. The accession number NZ_CP013988.1 serves as a reference for genetic and genomic studies related to this strain, facilitating future research endeavors.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyAerococcaceae
GenusAerococcus
SpeciesAerococcus urinaeequi
Strainstrain USDA-ARS-USMARC-56713

Profile

Physiology
Gram staining propertiesGram-positive
Shapesphere
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Aerococcus urinaeequi strain USDA-ARS-USMARC-56713
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens, Gallus gallus, Sus scrofa
Cell arrangementPairs
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityAnimal

Genome Summary

Aerococcus urinaeequi strain USDA-ARS-USMARC-56713


Gene Summary

Adenine Count

622766 bp

Thymine Count

621585 bp

Guanine Count

406567 bp

Cytosine Count

403410 bp

Genome Length

2054328 bp

Protein-coding Genes

1847 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
single-stranded dna-binding proteinAPT62_RS00055Q5XA62Negative10155 - 1070320015.5
30s ribosomal protein s6APT62_RS00060B9DVK4Negative10740 - 1104211728.8
dna gyrase subunit aAPT62_RS00065Q8DPM2Negative11205 - 1378495636.3
dna topoisomerase (atp-hydrolyzing) subunit bAPT62_RS00070Q839Z1Negative13803 - 1572571706.2
dna replication/repair protein recfAPT62_RS00075Q03I57Negative15907 - 1702242685.4
s4 domain-containing protein yaaaAPT62_RS00080P05650Negative17009 - 172578936.66
dna polymerase iii subunit betaAPT62_RS00085P05649Negative17643 - 1879442639.7
chromosomal replication initiator protein dnaaAPT62_RS00090Q03D55Negative19029 - 2036350609.7
50s ribosomal protein l34APT62_RS00095Q1WRF8Positive21097 - 212315341.75
ribonuclease p protein componentAPT62_RS00100B3WBV6Positive21278 - 2165514192.3

Displaying genes 11 – 20 of 1926 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

148 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm00007131,5-anhydro-D-fructoseC6H10O5Chemical structure of 1,5-anhydro-D-fructoseNot available
Average162.1406Da
Monoisotopic162.05282343Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm00008001,8-diazacyclotetradecane-2,9-dioneC12H22N2O2Chemical structure of 1,8-diazacyclotetradecane-2,9-dioneNot available
Average226.32Da
Monoisotopic226.168127956Da

Displaying 1–10 of 148 metabolites

Health Effects

No health effects information available for this bacterium.