Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas fragi |
| Strain | strain P121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1055364 bp
Thymine Count
1055101 bp
Guanine Count
1494902 bp
Cytosine Count
1496442 bp
Genome Length
5101809 bp
Protein-coding Genes
4473 genes
Non-Coding Genes
178 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| neutral zinc metallopeptidase | AV641_RS03385 | Not Available | Negative | 723411 - 724301 | 32151.0 |
| pca operon transcription factor pcaq | AV641_RS03390 | Not Available | Positive | 724555 - 725484 | 33634.9 |
| protocatechuate 3,4-dioxygenase subunit beta | AV641_RS03395 | Not Available | Positive | 725631 - 726350 | 26770.9 |
| protocatechuate 3,4-dioxygenase subunit alpha | AV641_RS03400 | Not Available | Positive | 726361 - 726966 | 22241.2 |
| dmt family transporter | AV641_RS03405 | Not Available | Negative | 727033 - 727917 | 31725.0 |
| mfs transporter | AV641_RS03410 | Not Available | Negative | 727963 - 729291 | 48568.5 |
| 3-dehydroshikimate dehydratase quic | AV641_RS03415 | Not Available | Positive | 729521 - 731431 | 70313.2 |
| tetr/acrr family transcriptional regulator | AV641_RS03420 | Not Available | Positive | 731503 - 732180 | 25879.0 |
| trna (uridine(54)-c5)-methyltransferase trma | AV641_RS03425 | Not Available | Negative | 732255 - 733343 | 41189.1 |
| ncs2 family permease | AV641_RS03430 | Not Available | Negative | 733340 - 734635 | 44831.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









