Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas fragi |
| Strain | strain P121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1055364 bp
Thymine Count
1055101 bp
Guanine Count
1494902 bp
Cytosine Count
1496442 bp
Genome Length
5101809 bp
Protein-coding Genes
4473 genes
Non-Coding Genes
178 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | AV641_RS02960 | Not Available | Positive | 622346 - 623449 | 40059.7 |
| lytic murein transglycosylase b | AV641_RS02965 | Not Available | Positive | 623455 - 624477 | 37946.1 |
| septal ring lytic transglycosylase rlpa family protein | AV641_RS02970 | Not Available | Positive | 624477 - 625463 | 35406.3 |
| d-alanyl-d-alanine carboxypeptidase family protein | AV641_RS02975 | Not Available | Positive | 625639 - 626796 | 42218.9 |
| duf493 domain-containing protein | AV641_RS02980 | Not Available | Positive | 626875 - 627150 | 10258.2 |
| lipoyl(octanoyl) transferase lipb | AV641_RS02985 | Not Available | Positive | 627150 - 627797 | 23456.3 |
| lipoyl synthase | AV641_RS02990 | Not Available | Positive | 627847 - 628839 | 37035.1 |
| ld-carboxypeptidase | AV641_RS02995 | Not Available | Positive | 628844 - 629788 | 33652.8 |
| lytic murein transglycosylase | AV641_RS03000 | Not Available | Negative | 629806 - 631116 | 47430.2 |
| alternative ribosome rescue factor arfa | AV641_RS03005 | Not Available | Negative | 631167 - 631316 | 5732.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









