Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas fragi |
| Strain | strain P121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1055364 bp
Thymine Count
1055101 bp
Guanine Count
1494902 bp
Cytosine Count
1496442 bp
Genome Length
5101809 bp
Protein-coding Genes
4473 genes
Non-Coding Genes
178 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit delta | AV641_RS01885 | Not Available | Positive | 403311 - 403643 | 12605.8 |
| sarcosine oxidase subunit alpha | AV641_RS01890 | Not Available | Positive | 403640 - 406657 | 109547.0 |
| sarcosine oxidase subunit gamma | AV641_RS01895 | Not Available | Positive | 406769 - 407401 | 22826.4 |
| formyltetrahydrofolate deformylase | AV641_RS01900 | Not Available | Positive | 407493 - 408350 | 32309.6 |
| formaldehyde dehydrogenase, glutathione-independent | AV641_RS01905 | Not Available | Positive | 408457 - 409656 | 42115.7 |
| anti-sigma factor domain-containing protein | AV641_RS01910 | Not Available | Negative | 409700 - 410374 | 24395.6 |
| rna polymerase sigma factor | AV641_RS01915 | Not Available | Negative | 410371 - 411003 | 23534.1 |
| duf2780 domain-containing protein | AV641_RS01925 | Not Available | Positive | 411391 - 411948 | 18457.1 |
| acyltransferase | AV641_RS01930 | Not Available | Negative | 411951 - 412838 | 34084.0 |
| atp-dependent zinc protease | AV641_RS01935 | Not Available | Positive | 413068 - 413568 | 18316.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









