Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas fragi |
| Strain | strain P121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1055364 bp
Thymine Count
1055101 bp
Guanine Count
1494902 bp
Cytosine Count
1496442 bp
Genome Length
5101809 bp
Protein-coding Genes
4473 genes
Non-Coding Genes
178 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase large subunit | AV641_RS21225 | Not Available | Negative | 4732734 - 4737182 | 161937.0 |
| aaa family atpase | AV641_RS21230 | Not Available | Negative | 4737513 - 4739084 | 54022.7 |
| 3-dehydroquinate synthase | AV641_RS21235 | Not Available | Negative | 4739095 - 4740195 | 39787.2 |
| shikimate kinase arok | AV641_RS21240 | Not Available | Negative | 4740537 - 4741055 | 19220.5 |
| type iv pilus secretin pilq | AV641_RS21245 | Not Available | Negative | 4741060 - 4742421 | 48751.7 |
| pilus assembly protein pilp | AV641_RS21250 | Not Available | Negative | 4742434 - 4742964 | 19112.8 |
| type 4a pilus biogenesis protein pilo | AV641_RS21255 | Not Available | Negative | 4742961 - 4743581 | 22713.7 |
| piln domain-containing protein | AV641_RS21260 | Not Available | Negative | 4743581 - 4744144 | 20920.9 |
| type iv pilus biogenesis protein pilm | AV641_RS21265 | Not Available | Negative | 4744144 - 4745115 | 33619.2 |
| penicillin-binding protein 1a | AV641_RS21270 | Not Available | Positive | 4745320 - 4747746 | 88157.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









