Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas fragi |
| Strain | strain P121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1055364 bp
Thymine Count
1055101 bp
Guanine Count
1494902 bp
Cytosine Count
1496442 bp
Genome Length
5101809 bp
Protein-coding Genes
4473 genes
Non-Coding Genes
178 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligogalacturonate-specific porin kdgm family protein | AV641_RS16960 | Not Available | Positive | 3783980 - 3784705 | 28053.5 |
| histidine-type phosphatase | AV641_RS16965 | Not Available | Positive | 3784744 - 3786048 | 47176.6 |
| histidine-type phosphatase | AV641_RS16970 | Not Available | Positive | 3786199 - 3787491 | 46936.6 |
| lysr substrate-binding domain-containing protein | AV641_RS16975 | Not Available | Positive | 3787609 - 3788544 | 33212.7 |
| fad-dependent tricarballylate dehydrogenase tcua | AV641_RS16980 | Not Available | Positive | 3788687 - 3790141 | 52600.6 |
| tricarballylate utilization 4fe-4s protein tcub | AV641_RS16985 | Not Available | Positive | 3790128 - 3791285 | 42024.6 |
| mfs transporter | AV641_RS16990 | Not Available | Positive | 3791333 - 3792634 | 47169.3 |
| hypothetical protein | AV641_RS16995 | Not Available | Positive | 3792721 - 3792972 | 9759.58 |
| fadr/gntr family transcriptional regulator | AV641_RS17000 | Not Available | Negative | 3792982 - 3793743 | 28327.7 |
| sdr family oxidoreductase | AV641_RS17005 | Not Available | Positive | 3793982 - 3794722 | 25430.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









