Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas fragi |
| Strain | strain P121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1055364 bp
Thymine Count
1055101 bp
Guanine Count
1494902 bp
Cytosine Count
1496442 bp
Genome Length
5101809 bp
Protein-coding Genes
4473 genes
Non-Coding Genes
178 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c5 family protein | AV641_RS00390 | Not Available | Negative | 90717 - 91130 | 13942.9 |
| cupin domain-containing protein | AV641_RS00395 | Not Available | Negative | 91311 - 91859 | 19992.0 |
| alanine racemase | AV641_RS00400 | Not Available | Negative | 91987 - 93060 | 39031.3 |
| rida family protein | AV641_RS00405 | Not Available | Negative | 93160 - 93513 | 12934.5 |
| d-amino acid dehydrogenase | AV641_RS00410 | Not Available | Negative | 93485 - 94786 | 47084.7 |
| lrp/asnc ligand binding domain-containing protein | AV641_RS00415 | Not Available | Positive | 94943 - 95431 | 18722.8 |
| ykgj family cysteine cluster protein | AV641_RS00420 | Not Available | Negative | 95482 - 95835 | 13038.8 |
| fad-binding oxidoreductase | AV641_RS00425 | Not Available | Positive | 95983 - 97284 | 46907.4 |
| duf1127 domain-containing protein | AV641_RS00430 | Not Available | Negative | 97323 - 97556 | 8726.48 |
| plp-dependent aminotransferase family protein | AV641_RS00435 | Not Available | Positive | 97726 - 99162 | 52983.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









