Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas fragi |
| Strain | strain P121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1055364 bp
Thymine Count
1055101 bp
Guanine Count
1494902 bp
Cytosine Count
1496442 bp
Genome Length
5101809 bp
Protein-coding Genes
4473 genes
Non-Coding Genes
178 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-methyl-5-thioribose-1-phosphate isomerase | AV641_RS08135 | Not Available | Positive | 1744977 - 1746053 | 38598.4 |
| f0f1 atp synthase subunit alpha | AV641_RS08140 | Not Available | Positive | 1746456 - 1749117 | 98317.5 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | AV641_RS08145 | Not Available | Positive | 1749287 - 1750375 | 39917.6 |
| prephenate dehydratase | AV641_RS08150 | Not Available | Positive | 1750375 - 1751469 | 40364.5 |
| histidinol-phosphate transaminase | AV641_RS08155 | Not Available | Positive | 1751481 - 1752593 | 39723.6 |
| bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase | AV641_RS08160 | Not Available | Positive | 1752598 - 1754829 | 78394.9 |
| (d)cmp kinase | AV641_RS08165 | Not Available | Positive | 1754829 - 1755512 | 24249.1 |
| 30s ribosomal protein s1 | AV641_RS08170 | Not Available | Positive | 1755635 - 1757329 | 62344.0 |
| integration host factor subunit beta | AV641_RS08175 | Not Available | Positive | 1757739 - 1758035 | 11086.3 |
| lipopolysaccharide assembly protein lapa domain-containing protein | AV641_RS08180 | Not Available | Positive | 1758060 - 1758311 | 9242.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









