Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas fragi |
| Strain | strain P121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1055364 bp
Thymine Count
1055101 bp
Guanine Count
1494902 bp
Cytosine Count
1496442 bp
Genome Length
5101809 bp
Protein-coding Genes
4473 genes
Non-Coding Genes
178 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AV641_RS07275 | Not Available | Positive | 1548062 - 1548751 | 24911.3 |
| duf4280 domain-containing protein | AV641_RS07280 | Not Available | Positive | 1549104 - 1549475 | 12402.4 |
| type vi secretion system vgr family protein | AV641_RS07285 | Not Available | Positive | 1549490 - 1551574 | 74985.9 |
| type vi secretion system lipoprotein tssj | AV641_RS07290 | Not Available | Positive | 1551561 - 1552097 | 19760.7 |
| type vi secretion system baseplate subunit tssk | AV641_RS07295 | Not Available | Positive | 1552084 - 1553424 | 49092.1 |
| type ivb secretion system protein icmh/dotu | AV641_RS07300 | Not Available | Positive | 1553421 - 1554626 | 44488.5 |
| type vi secretion system protein | AV641_RS23780 | Not Available | Positive | 1554734 - 1556146 | 50573.4 |
| type vi secretion system membrane subunit tssm | AV641_RS23785 | Not Available | Positive | 1556100 - 1557941 | 67318.0 |
| response regulator transcription factor | AV641_RS07310 | Not Available | Positive | 1558368 - 1559069 | 25950.9 |
| hypothetical protein | AV641_RS07315 | Not Available | Positive | 1559288 - 1559503 | 7841.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









