Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas fragi |
| Strain | strain P121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1055364 bp
Thymine Count
1055101 bp
Guanine Count
1494902 bp
Cytosine Count
1496442 bp
Genome Length
5101809 bp
Protein-coding Genes
4473 genes
Non-Coding Genes
178 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AV641_RS23385 | Not Available | Positive | 1535518 - 1536753 | 45043.5 |
| type vi secretion system protein tssa | AV641_RS07230 | Not Available | Positive | 1537317 - 1538345 | 37702.2 |
| type vi secretion system contractile sheath small subunit | AV641_RS07235 | Not Available | Positive | 1538375 - 1538887 | 18711.2 |
| type vi secretion system contractile sheath large subunit | AV641_RS07240 | Not Available | Positive | 1538898 - 1540388 | 54886.6 |
| type vi secretion system tube protein hcp | AV641_RS07245 | Not Available | Positive | 1540470 - 1540940 | 17424.6 |
| type vi secretion system baseplate subunit tsse | AV641_RS07250 | Not Available | Positive | 1541046 - 1541534 | 17834.4 |
| type vi secretion system baseplate subunit tssf | AV641_RS07255 | Not Available | Positive | 1541527 - 1543407 | 68528.5 |
| type vi secretion system baseplate subunit tssg | AV641_RS07260 | Not Available | Positive | 1543392 - 1544378 | 36913.3 |
| type vi secretion system atpase tssh | AV641_RS07265 | Not Available | Positive | 1544371 - 1546983 | 96615.2 |
| hypothetical protein | AV641_RS07270 | Not Available | Positive | 1547156 - 1547800 | 24123.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









