Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas fragi |
| Strain | strain P121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1055364 bp
Thymine Count
1055101 bp
Guanine Count
1494902 bp
Cytosine Count
1496442 bp
Genome Length
5101809 bp
Protein-coding Genes
4473 genes
Non-Coding Genes
178 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph:quinone reductase | AV641_RS00100 | Not Available | Negative | 23182 - 24159 | 34578.5 |
| oxygen-dependent coproporphyrinogen oxidase | AV641_RS00105 | Not Available | Positive | 24321 - 25247 | 35052.9 |
| shikimate dehydrogenase | AV641_RS00110 | Not Available | Positive | 25247 - 26068 | 28936.7 |
| sulp family inorganic anion transporter | AV641_RS00115 | Not Available | Negative | 26153 - 27721 | 56239.8 |
| choline-sulfatase | AV641_RS00120 | Not Available | Negative | 27868 - 29376 | 56547.9 |
| choline sulfate utilization transcriptional regulator | AV641_RS00125 | Not Available | Positive | 29489 - 30400 | 34031.9 |
| dopa 4,5-dioxygenase family protein | AV641_RS00130 | Not Available | Positive | 30429 - 30755 | 12026.6 |
| choline transporter bett | AV641_RS00135 | Not Available | Positive | 31076 - 33073 | 73830.9 |
| sdr family oxidoreductase | AV641_RS00140 | Not Available | Negative | 33165 - 33905 | 26030.1 |
| efflux rnd transporter permease subunit | AV641_RS00145 | Not Available | Negative | 34133 - 37195 | 112123.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









