Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate dehydrogenase | HRUBRI_RS04550 | Q9Z3S2 | Negative | 1066608 - 1068074 | 55220.1 |
| glucose-6-phosphate isomerase | HRUBRI_RS04555 | Q9JYX3 | Negative | 1068123 - 1069784 | 61180.8 |
| phosphogluconate dehydratase | HRUBRI_RS04560 | Q9Z3S0 | Positive | 1070164 - 1072035 | 65602.9 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | HRUBRI_RS04565 | P0A957 | Positive | 1072032 - 1072661 | 21452.4 |
| ydcf family protein | HRUBRI_RS04570 | Not Available | Negative | 1072758 - 1073327 | 21076.7 |
| hypothetical protein | HRUBRI_RS04575 | Not Available | Negative | 1073430 - 1073732 | 11598.9 |
| peptidoglycan recognition family protein | HRUBRI_RS04580 | Not Available | Negative | 1073729 - 1074508 | 28760.2 |
| paar domain-containing protein | HRUBRI_RS04585 | Not Available | Negative | 1074505 - 1075074 | 20295.8 |
| prolipoprotein diacylglyceryl transferase | HRUBRI_RS04590 | A6SVP3 | Negative | 1075349 - 1076185 | 31100.9 |
| lysr family transcriptional regulator | HRUBRI_RS04595 | P52670 | Negative | 1076275 - 1077177 | 32699.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



