Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacetone kinase subunit dhal | HRUBRI_RS04500 | P76014 | Negative | 1056734 - 1057384 | 22729.3 |
| dihydroxyacetone kinase subunit dhak | HRUBRI_RS04505 | Q927E6 | Negative | 1057381 - 1058394 | 35129.7 |
| gold/dthd family dehydrogenase | HRUBRI_RS04510 | Q92EU6 | Negative | 1058440 - 1059222 | 27378.3 |
| substrate-binding domain-containing protein | HRUBRI_RS04515 | Not Available | Negative | 1059219 - 1060211 | 35275.7 |
| abc transporter permease | HRUBRI_RS04520 | P0AGI3 | Negative | 1060243 - 1061229 | 33180.3 |
| sugar abc transporter atp-binding protein | HRUBRI_RS04525 | Q87ZE0 | Negative | 1061302 - 1062780 | 53642.1 |
| ribose 5-phosphate isomerase b | HRUBRI_RS04530 | Q6D8V9 | Positive | 1063078 - 1063539 | 16385.8 |
| sugar-binding transcriptional regulator | HRUBRI_RS04535 | Q7N2E0 | Positive | 1063611 - 1064570 | 35031.8 |
| transaldolase | HRUBRI_RS04540 | B2U9W5 | Negative | 1064669 - 1065604 | 34273.1 |
| sis domain-containing protein | HRUBRI_RS04545 | P46118 | Negative | 1065715 - 1066569 | 30669.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



