Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | HRUBRI_RS04405 | P31135 | Negative | 1004602 - 1005882 | 46618.8 |
| abc transporter substrate-binding protein | HRUBRI_RS04410 | Q9I6R6 | Negative | 1005967 - 1007010 | 37753.1 |
| abc transporter atp-binding protein | HRUBRI_RS04415 | Q1AS06 | Negative | 1007177 - 1008301 | 41065.6 |
| 4-aminobutyrate--2-oxoglutarate transaminase | HRUBRI_RS04420 | P50457 | Negative | 1008417 - 1009697 | 45469.0 |
| plp-dependent aminotransferase family protein | HRUBRI_RS04425 | Not Available | Positive | 1009835 - 1011415 | 57917.1 |
| aspartate carbamoyltransferase | HRUBRI_RS04430 | A5EVP6 | Negative | 1011440 - 1012735 | 47262.7 |
| gmc oxidoreductase | HRUBRI_RS24270 | Not Available | Positive | 1013040 - 1013198 | 5744.97 |
| hemolysin family protein | HRUBRI_RS04435 | O07589 | Positive | 1013338 - 1014660 | 48842.7 |
| yeca family protein | HRUBRI_RS04440 | P0AD05 | Negative | 1014699 - 1015400 | 26193.2 |
| helix-turn-helix domain-containing protein | HRUBRI_RS04445 | Not Available | Negative | 1015545 - 1015982 | 16391.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



